fimC:Quickview: Difference between revisions
Jump to navigation
Jump to search
/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php |
touch |
||
| Line 23: | Line 23: | ||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| id="R49aee5909b1c1" class=" tableEdit New_Quickview_Table" | {| id="R49aee5909b1c1" class=" tableEdit New_Quickview_Table" | ||
| Line 43: | Line 43: | ||
!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
chaperone, periplasmic<ref name='LIB:Riley_2006'/>, B4316<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FimC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''chaperone, periplasmic<ref name='LIB:Riley_2006'/>, B4316<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FimC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4307, JW4279, b4316'' | ||
|- | |- | ||
!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
| Line 63: | Line 63: | ||
!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
|| | || | ||
[http://porteco.org/AjaxSearch.jsp?searchString=fimC&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fimC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10310]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000304&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fimC&loc=MG1655%3A4542327..4543052,W3110%3A4548984..4549709,REL606%3A4525218..4525943,BW2952%3A4480812..4481537]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4480812&end=4481537&gene=fimC&aa=msnknvnvrksqeitfcllagilmfmammvagraeagvalgatrviypagqkqeqlavtnndenstyliqswvenadgvkdgrfivtpplfamkgkkentlrildatnnqlpqdreslfwmnvkaipsmdkskltentlqlaiisriklyyrpaklalppdqaaeklrfrrsansltlinptpyyltvtelnagtrvlenalvppmgestvklpsdagsnityrtindygaltpkmtgvme]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fimC+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fimC]] | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Latest revision as of 21:50, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
fimC |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
periplasmic chaperone, required for type 1 fimbriae[2][3] Periplasmic chaperone for type 1 fimbriae; FimCD chaperone-usher transport[4] |
| Product Synonyms(s) |
chaperone, periplasmic[1], B4316[2][1], PilC[2][1], PilB[2][1], FimC[2][1] , ECK4307, JW4279, b4316 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): fimAICDFGH[2] |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
FimC has Ig-like domains: pfam PF00345 aligns to N-terminal residues 37-157, and pfam PF02753 aligns to C-terminal residues 161-237. First 36 aa are a type I signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.