kdpD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0683, b0695, JW0683, kac''<ref name='LIB:Riley_2006'/>
''ECK0683, b0695, JW0683, kac''<ref name='LIB:Riley_2006'/>, kac''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein<ref name='LIB:Riley_2006'/>, sensory histidine kinase<ref name='LIB:Riley_2006'/>, B0695<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Kac<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sensor kinase-phosphotransferase KdpD-P<SUP>his</SUP><ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, phospho-KdpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sensor kinase-phosphotransferase KdpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
''fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein<ref name='LIB:Riley_2006'/>, sensory histidine kinase<ref name='LIB:Riley_2006'/>, B0695<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Kac<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sensor kinase-phosphotransferase KdpD-P<SUP>his</SUP><ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, phospho-KdpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sensor kinase-phosphotransferase KdpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ECK0683, JW0683, kac, b0695''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=kdpD&s=search PortEco search(kdpD)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=kdpD&loc=MG1655:723637..720953,W3110:724836..722152,DH10B:776229..773545,REL606:706512..703825,BW2952:623713..626397 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=623713&end=626397&gene=kdpD&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdpD+AND+escherichia+coli Pubmed(kdpD)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=kdpD Textpresso(kdpD)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=kdpD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10516]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000509&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=kdpD&loc=MG1655%3A723637..720953,W3110%3A724836..722152,DH10B%3A776229..773545,REL606%3A706512..703825,BW2952%3A623713..626397]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=623713&end=626397&gene=kdpD&aa=mnneplrpdpdrlleqtaaphrgklkvffgacagvgktwamlaeaqrlraqgldivvgvvethgrkdtaamleglavlplkrqayrgrhisefdldaalarrpalilmdelahsnapgsrhpkrwqdieelleagidvfttvnvqhleslndvvsgvtgiqvretvpdpffdaaddvvlvdlppddlrqrlkegkvyiagqaeraiehffrkgnlialrelalrrtadrvdeqmrawrghpgeekvwhtrdaillcighntgseklvraaarlasrlgsvwhavyvetpalhrlpekkrrailsalrlaqelgaetatlsdpaeekavvryarehnlgkiilgrpasrrwwrretfadrlariapdldqvlvaldeppartinnapdnrsfkdkwrvqiqgcvvaaalcavitliamqwlmafdaanlvmlyllgvvvvalfygrwpsvvatvinvvsfdlffiaprgtlavsdvqylltfavmltvglvignltagvryqarvaryreqrtrhlyemskalavgrspqdiaatseqfiastfharsqvllpddngklqplthpqgmtpwddaiaqwsfdkglpagagtdtlpgvpyqilplksgektyglvvvepgnlrqlmipeqqrlletftllvanalerltltaseeqarmasereqirnallaalshdlrtpltvlfgqaeiltldlasegspharqaseirqhvlnttrlvnnlldmariqsggfnlkkewltleevvgsalqmlepglsspinlslpepltlihvdgplfervlinllenavkyagaqaeigidahvegenlqldvwdngpglppgqeqtifdkfargnkesavpgvglglaicraivdvhggtitafnrpeggacfrvtlpqqtapeleefhedm]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdpD+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=kdpD]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

kdpD

Gene Synonym(s)

ECK0683, b0695, JW0683, kac[1], kac

Product Desc.

KdpD[2][3], KdpD-Phis[2][3]

Component of KdpD[2][3]


Sensor kinase for the kdp operon; has autokinase activity and KdpE-directed phosphotransferase and phosphatase activities; dimeric[4]

Product Synonyms(s)

fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein[1], sensory histidine kinase[1], B0695[2][1], Kac[2][1], sensor kinase-phosphotransferase KdpD-Phis[2][1], phospho-KdpD[2][1], sensor kinase-phosphotransferase KdpD[2][1], ECK0683, JW0683, kac, b0695

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): kdpDE[2]

Regulation/Activity
Quick Links



        

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Notes

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Inhibition of KdpD phosphatase activity leads to an accumulation of phospho-KdpE and activation of kdpFABC transcription.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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