matB:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php
touch
 
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|  id="P49aeebf8b565e"  class=" tableEdit New_Quickview_Table"   
{|  id="P49aeebf8b565e"  class=" tableEdit New_Quickview_Table"   


Line 33: Line 33:
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''yagZ, ECK0292, b0293, JW0287''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''yagZ, ECK0292, b0293, JW0287''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, ecpA, JW0287''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
Line 43: Line 43:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
conserved protein<ref name='LIB:Riley_2006'/>, B0293<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YagZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MatB<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
''conserved protein<ref name='LIB:Riley_2006'/>, B0293<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YagZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MatB<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , ECK0292, ecpA, JW0287, yagZ, b0293''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
Line 63: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://porteco.org/AjaxSearch.jsp?searchString=matB&s=search PortEco search(matB)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=matB&loc=MG1655:309895..309308,W3110:309895..309308,DH10B:285445..284858,REL606:280266..280901 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=280266&end=280901&gene=matB&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=matB+AND+escherichia+coli Pubmed(matB)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=matB Textpresso(matB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=matB&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=matB&loc=MG1655%3A309895..309308,W3110%3A309895..309308,DH10B%3A285445..284858,REL606%3A280266..280901]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=280266&end=280901&gene=matB&aa=mkkkvlaialvtvftgmgvaqaadvtaqavatwsatakkdttsklvvtplgslafqyaegikgfnsqkglfdvaiegdstatafkltsrlitntltqldtsgstlnvgvdyngaavektgdtvmidtangvlggnlsplangynasnrttaqdgftfsiisgttngttavtdystlpegiwsgdvsvqfdatwts]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=matB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=matB]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:48, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

matB

Gene Synonym(s)

yagZ, ECK0292, b0293, JW0287[1][2], ecpA, JW0287

Product Desc.

conserved protein[3][2]

Cryptic Mat fimbrillin gene, expressed in O18acK1H7 strains[4]

Product Synonyms(s)

conserved protein[1], B0293[3][1], YagZ[3][1], MatB[2][1] , ECK0292, ecpA, JW0287, yagZ, b0293

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yagZ[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


SecB-dependent cleavage (Marani, 2006). O18K1H7 matABC genes are required for Mat fimbria formation when cloned in K-12. matA mRNA was detected in K-12, but not matBC mRNA.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=matB:Quickview&oldid=1396541"