pepD:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0238, b0237, JW0227, pepH''<ref name='LIB:Riley_2006'/>
''ECK0238, b0237, JW0227, pepH''<ref name='LIB:Riley_2006'/>, pepH''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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aminoacyl-histidine dipeptidase (peptidase D)<ref name='LIB:Riley_2006'/>, B0237<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PepH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''aminoacyl-histidine dipeptidase (peptidase D)<ref name='LIB:Riley_2006'/>, B0237<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PepH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0238, JW0227, pepH, b0237''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=pepD&s=search PortEco search(pepD)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=pepD&loc=MG1655:255716..254259,W3110:255716..254259,DH10B:229820..228363,REL606:260207..258750,BW2952:254258..255715 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=254258&end=255715&gene=pepD&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pepD+AND+escherichia+coli Pubmed(pepD)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pepD Textpresso(pepD)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pepD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10695]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000687&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pepD&loc=MG1655%3A255716..254259,W3110%3A255716..254259,DH10B%3A229820..228363,REL606%3A260207..258750,BW2952%3A254258..255715]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=254258&end=255715&gene=pepD&aa=mselsqlspqplwdifakicsiphpsyheeqlaeyivgwakekgfhverdqvgnilirkpatagmenrkpvvlqahldmvpqknndtvhdftkdpiqpyidgewvkargttlgadngigmasalavladenvvhgplevlltmteeagmdgafglqgnwlqadilintdseeegeiymgcaggidftsnlhldreavpagfetfkltlkglkgghsggeihvglgnankllvrflaghaeeldlrlidfnggtlrnaipreafatiavaadkvdvlkslvntyqeilknelaekeknlallldsvandkaaliaksrdtfirllnatpngvirnsdvakgvvetslnvgvvtmtdnnveihclirslidsgkdyvvsmldslgklagakteakgaypgwqpdanspvmhlvretyqrlfnktpniqiihaglecglfkkpypemdmvsigptitgphspdeqvhiesvghywtlltellkeipak]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pepD+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pepD]]&nbsp;&nbsp;


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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pepD

Gene Synonym(s)

ECK0238, b0237, JW0227, pepH[1], pepH

Product Desc.

PepD[2][3];

Component of peptidase D[3]

Peptidase D, Xaa-His dipeptidase[4]

Product Synonyms(s)

aminoacyl-histidine dipeptidase (peptidase D)[1], B0237[2][1], PepH[2][1] , ECK0238, JW0227, pepH, b0237

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pepD[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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CsgD regulon, repressed. HT_Cmplx19_Cyt: PepD+Pgm+Zwf. HT_Cmplx41_Mem: Gnd+PepD.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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