ydhJ:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1640, b1644, JW1636''<ref name='LIB:Riley_2006'/>
''ECK1640, b1644, JW1636''<ref name='LIB:Riley_2006'/>, JW1636''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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undecaprenyl pyrophosphate phosphatase<ref name='LIB:Riley_2006'/>, B1644<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''undecaprenyl pyrophosphate phosphatase<ref name='LIB:Riley_2006'/>, B1644<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1640, JW1636, b1644''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=ydhJ&s=search PortEco search(ydhJ)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=ydhJ&loc=MG1655:1719288..1720145,W3110:1722978..1723835,DH10B:1809859..1810716,REL606:1698458..1699315,BW2952:1611347..1612204 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1611347&end=1612204&gene=ydhJ&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydhJ+AND+escherichia+coli Pubmed(ydhJ)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydhJ Textpresso(ydhJ)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydhJ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6884]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003473&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydhJ&loc=MG1655%3A1719288..1720145,W3110%3A1722978..1723835,DH10B%3A1809859..1810716,REL606%3A1698458..1699315,BW2952%3A1611347..1612204]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1611347&end=1612204&gene=ydhJ&aa=mrlpcsgntdcvvtmsiktikyfstiivavvavlagwwlwnyymqspwtrdgkiraeqvsitpqvsgrivelnikdnqlvnagdllltidktpfqiaelnaqaqlakaqsdlakanneanrrrhlsqnfisaeeldtanlnvkamqasvdaaqatlkqaqwqlaqteirapvsgwvtnlttrigdyadtgkplfalvdshsfyvigyfeetklrhiregapaqitlysdnktlqghvssigraiydqsvesdsslipdvkpnvpwvrlaqrvpvrfaldkvpgdvtlvsgttcsiavgq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydhJ+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydhJ]]&nbsp;&nbsp;


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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ydhJ

Gene Synonym(s)

ECK1640, b1644, JW1636[1], JW1636

Product Desc.

putative membrane protein[2]; conserved protein[3]

Putative membrane fusion protein (MFP) of YdhJK efflux pump, function unknown[4]

Product Synonyms(s)

undecaprenyl pyrophosphate phosphatase[1], B1644[2][1], YdhJ[2][1] , ECK1640, JW1636, b1644

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydhIJK[2]

Regulation/Activity
Quick Links



        

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Notes

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YdhJ has a putative signal anchor. Overexpression causes abnormal biofilm architecture and reduced motility.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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