yfjR:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2630, b2634, JW2615''<ref name='LIB:Riley_2006'/>
''ECK2630, b2634, JW2615''<ref name='LIB:Riley_2006'/>, JW2615''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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CP4-57 prophage; predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B2634<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfjR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''CP4-57 prophage; predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B2634<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfjR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2630, JW2615, b2634''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=yfjR&s=search PortEco search(yfjR)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=yfjR&loc=MG1655:2767725..2768426,W3110:2768359..2769060,DH10B:2859490..2860191,BW2952:2653537..2654238 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2653537&end=2654238&gene=yfjR&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yfjR+AND+escherichia+coli Pubmed(yfjR)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yfjR Textpresso(yfjR)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yfjR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7369]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003937&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yfjR&loc=MG1655%3A2767725..2768426,W3110%3A2768359..2769060,DH10B%3A2859490..2860191,BW2952%3A2653537..2654238]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2653537&end=2654238&gene=yfjR&aa=mtqaerrhdrlavrlsliisrlvagetlsvrklaaefgvsvrtlrrdfrerlmyldleyqsgycrlrtagsemqmvpdvlifahrsglaglfpgldrrlvnallmcdespcviapanpvpspsgalsfwrliqaitgrrrvtliaegrrcerlapcrllihqqtwylvaeheghiavftldeihliqplqetfrrndslcrlvedpvfiqalphfrfiqhslltfvpadsppe]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yfjR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yfjR]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yfjR

Gene Synonym(s)

ECK2630, b2634, JW2615[1], JW2615

Product Desc.

CP4-57 prophage; predicted DNA-binding transcriptional regulator[2][3]

Function unknown, CP4-57 putative defective prophage; predicted transcriptional regulator[4]

Product Synonyms(s)

CP4-57 prophage; predicted DNA-binding transcriptional regulator[1], B2634[2][1], YfjR[2][1] , ECK2630, JW2615, b2634

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yfjR[2]

Regulation/Activity
Quick Links



        

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Notes

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The YjfR family contains a predicted HTH domain.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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