ygiN:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3020, b3029, JW2997''<ref name='LIB:Riley_2006'/>
''ECK3020, b3029, JW2997''<ref name='LIB:Riley_2006'/>, JW2997''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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quinol monooxygenase<ref name='LIB:Riley_2006'/>, B3029<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''quinol monooxygenase<ref name='LIB:Riley_2006'/>, B3029<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3020, JW2997, b3029''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=ygiN&s=search PortEco search(ygiN)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=ygiN&loc=MG1655:3171164..3171478,W3110:3171798..3172112,DH10B:3268909..3269223,REL606:3107314..3107628,BW2952:3058312..3058626 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3058312&end=3058626&gene=ygiN&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygiN+AND+escherichia+coli Pubmed(ygiN)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ygiN Textpresso(ygiN)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ygiN&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12657]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002347&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ygiN&loc=MG1655%3A3171164..3171478,W3110%3A3171798..3172112,DH10B%3A3268909..3269223,REL606%3A3107314..3107628,BW2952%3A3058312..3058626]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3058312&end=3058626&gene=ygiN&aa=mltviaeirtrpgqhhrqavldqfakivptvlkeegchgyapmvdcaagvsfqsmapdsivmieqwesiahleahlqtphmkayseavkgdvlemnirilqpgi]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygiN+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ygiN]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ygiN

Gene Synonym(s)

ECK3020, b3029, JW2997[1], JW2997

Product Desc.

quinol monooxygenase[2][3];

Component of quinol monooxygenase[3]

Quinol monooxygenase; MdaB and YgiN form an enzymatic quinone reduction-oxidation cycle in vitro; expressed protein[4]

Product Synonyms(s)

quinol monooxygenase[1], B3029[2][1], YgiN[2][1] , ECK3020, JW2997, b3029

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygiN[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YgiN is structurally similar to YdhR and the ActVA-Orf6 hydroxyquinone monooxygenase. YgiN was able to reoxidize menadiol, a product of MdaB, back to menadione. YgiN is in an operon with mdaB.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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