yqiK:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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[[EcoCyc]]
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EcoCyc:G7589
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG14232
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120004145
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3983
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010013
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000015278 (score: 1.000; bootstrap: 62%)
  • ENSANGP00000014414 (score: 0.517)
  • ENSANGP00000009431 (score: 0.394)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000023511 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000032638 (score: 0.372)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G25250 (score: 1.000; bootstrap: 54%)
  • AT5G25260 (score: 0.930)
  • AT5G64870 (score: 0.856)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013135 (score: 1.000; bootstrap: 73%)
  • ENSBTAP00000013288 (score: 0.323)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000000650 (score: 1.000; bootstrap: 72%)
  • ENSCAFP00000027777 (score: 0.413)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000017998 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-020430-3 (score: 1.000; bootstrap: 60%)
  • ZDB-CDNA-040425-2302 (score: 0.893)
  • ZDB-GENE-040426-1368 (score: 0.893)
  • ZDB-CDNA-040425-2982 (score: 0.568)
  • ZDB-GENE-020430-2 (score: 0.404)
  • ZDB-GENE-000210-36 (score: 0.391)
  • ZDB-CDNA-040425-302 (score: 0.232)
  • ZDB-GENE-020430-1 (score: 0.163)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0024753 (score: 1.000; bootstrap: 100%)
  • FBgn0024754 (score: 0.377)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20892-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000259846 (score: 1.000; bootstrap: 100%)
  • ENSP00000333941 (score: 0.376)

From Inparanoid:20070104

Mus musculus

  • MGI:1100500 (score: 1.000; bootstrap: 71%)
  • MGI:103309 (score: 0.379)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000030607 (score: 1.000; bootstrap: 68%)
  • ENSPTRP00000015258 (score: 0.376)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000151851 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000146180 (score: 0.385)
  • NEWSINFRUP00000162434 (score: 0.366)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00016228001 (score: 1.000; bootstrap: 67%)
  • GSTENP00012253001 (score: 0.865)
  • GSTENP00015301001 (score: 0.393)
  • GSTENP00033728001 (score: 0.295)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000015050 (score: 1.000; bootstrap: 77%)
  • ENSXETP00000047879 (score: 0.281)
  • ENSXETP00000031383 (score: 0.227)
  • ENSXETP00000051960 (score: 0.130)

From Inparanoid:20070104

E. coli O157

Z4403

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01145 SPFH domain / Band 7 family

Panther (EcoliWiki Page)

PTHR13806:SF2

Superfamily (EcoliWiki Page)

SUPERFAMILY:117892

EcoCyc

EcoCyc:G7589

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14232

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004145

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3983

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010013

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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