zupT:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
touch
touch
 
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="F46abf1f714671"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="F46abf1f714671"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 255: Line 255:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="L46abf225c9335"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="L46abf225c9335"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
Line 272: Line 272:
|
|
   
   
|-
|
[[EcoCyc]]
|
EcoCyc:EG11167
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG11167
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120001150
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB1155
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0009977
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 291: Line 326:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="B46a83328751e5"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="B46a83328751e5"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:35, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000021526 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000029396 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G20870 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000025078 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00033428 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00019077 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006543 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000018239 (score: 1.000; bootstrap: 60%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-3023 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2090 (score: 0.252)
  • ZDB-GENE-040426-1157 (score: 0.252)
  • ZDB-GENE-030616-17 (score: 0.052)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218806 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0033665 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA12104-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007021 (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000348477 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000018647 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008129 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Mus musculus

  • MGI:1917056 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Oryza gramene

  • Q6H7N1 (score: 1.000; bootstrap: 99%)
  • Q6Z1Z9 (score: 0.539)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000042260 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000050117 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC1269 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000181884 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003930001 (score: 1.000; bootstrap: 100%)
  • GSTENP00016891001 (score: 0.290)
  • GSTENP00031769001 (score: 0.149)
  • GSTENP00019943001 (score: 0.131)
  • GSTENP00032551001 (score: 0.115)
  • GSTENP00002880001 (score: 0.109)
  • GSTENP00028573001 (score: 0.095)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000002905 (score: 1.000; bootstrap: 51%)
  • ENSXETP00000036765 (score: 0.192)
  • ENSXETP00000032740 (score: 0.136)
  • ENSXETP00000020960 (score: 0.124)
  • ENSXETP00000043929 (score: 0.077)
  • ENSXETP00000046134 (score: 0.070)

From Inparanoid:20070104

Shigella flexneri

YGIE

From SHIGELLACYC

E. coli O157

YGIE

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02535 ZIP Zinc transporter

Panther (EcoliWiki Page)

PTHR11065:SF5

EcoCyc

EcoCyc:EG11167

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11167

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001150

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1155

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009977

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=zupT:Evolution&oldid=1391170"