ymdB:Evolution: Difference between revisions

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[[EcoCyc]]
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EcoCyc:G6550
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13874
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003146
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3633
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003549
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026805 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000003250 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G40600 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000022152 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00028406 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007106 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000021700 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1490 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040425-2424 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040912-102 (score: 0.119)
  • ZDB-GENE-040912-100 (score: 0.119)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0204524 (score: 1.000; bootstrap: 99%)
  • DDB0202152 (score: 0.076)
  • DDB0217701 (score: 0.065)
  • DDB0218164 (score: 0.057)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0042135 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15091-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000019695 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000255681 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000000654 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000022828 (score: 1.000; bootstrap: 82%)
  • ENSMODP00000022840 (score: 0.531)
  • ENSMODP00000022835 (score: 0.054)

From Inparanoid:20070104

Mus musculus

  • MGI:1920149 (score: 1.000; bootstrap: 99%)
  • MGI:2147583 (score: 0.134)

From Inparanoid:20070104

Oryza gramene

  • Q7XDZ9 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000006563 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000028749 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000174827 (score: 1.000; bootstrap: 50%)
  • NEWSINFRUP00000163314 (score: 0.127)
  • NEWSINFRUP00000127717 (score: 0.072)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00016897001 (score: 1.000; bootstrap: 62%)
  • GSTENP00034907001 (score: 0.149)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000050550 (score: 1.000; bootstrap: 65%)
  • ENSXETP00000050557 (score: 0.078)

From Inparanoid:20070104

Shigella flexneri

S1115

From SHIGELLACYC

E. coli O157

Z1679

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01661 Macro domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52949

Panther (EcoliWiki Page)

PTHR11106:SF43

EcoCyc

EcoCyc:G6550

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13874

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003146

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3633

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003549

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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