yicR:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=yicR&s=search PortEco search(yicR)] [http://ecoliwiki.net/tools/display_dna.php?gene=yicR&loc=MG1655:3810582..3809914,W3110:3827856..3828524,DH10B:3908159..3907491,REL606:3750246..3750914,BW2952:3698240..3698908 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3698240&end=3698908&gene=yicR&aa= | [http://porteco.org/AjaxSearch.jsp?searchString=yicR&s=search PortEco search(yicR)] [http://ecoliwiki.net/tools/display_dna.php?gene=yicR&loc=MG1655:3810582..3809914,W3110:3827856..3828524,DH10B:3908159..3907491,REL606:3750246..3750914,BW2952:3698240..3698908 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3698240&end=3698908&gene=yicR&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yicR+AND+escherichia+coli Pubmed(yicR)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yicR Textpresso(yicR)] | ||
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Revision as of 21:01, 16 August 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yicR |
|---|---|
| Gene Synonym(s) |
ECK3628, b3638, JW5643, radC[1] |
| Product Desc. |
Function unknown; mistakenly thought to be allelic to radC102 (corrected by Lombardo, 2000)[4] |
| Product Synonyms(s) |
protein associated with replication fork, possible DNA repair protein[1], B3638[2][1], YicR[2][1], RadC[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): yicR-rpmBG[2], yicR-rpmBG-mutM[2] |
| Regulation/Activity | |
| Quick Links |
PortEco search(yicR) DNA display Protein display Pubmed(yicR) Textpresso(yicR) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
yicR is paralogous to cryptic prophage genes yfjY, ykfG, yeeS, although they lack the N-terminal helix-hairpin-helix (HhH) domain of YicR. CreBC regulon. yicR is predicted to have a CRP-S promoter co-regulated by both Crp and Sxy (Cameron, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.