hicB:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=ydcQ&s=search PortEco search(ydcQ)] [http://ecoliwiki.net/tools/display_dna.php?gene=ydcQ&loc=MG1655:1507511..1507948,W3110:1511201..1511638,DH10B:1598106..1598543,REL606:1479597..1480034,BW2952:1399591..1400007 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1399591&end=1400007&gene=ydcQ&aa= | [http://porteco.org/AjaxSearch.jsp?searchString=ydcQ&s=search PortEco search(ydcQ)] [http://ecoliwiki.net/tools/display_dna.php?gene=ydcQ&loc=MG1655:1507511..1507948,W3110:1511201..1511638,DH10B:1598106..1598543,REL606:1479597..1480034,BW2952:1399591..1400007 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1399591&end=1400007&gene=ydcQ&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydcQ+AND+escherichia+coli Pubmed(ydcQ)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydcQ Textpresso(ydcQ)] | ||
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Revision as of 18:07, 16 August 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
hicB |
|---|---|
| Gene Synonym(s) |
ECK1432, b1438, JW1433, ydcQ[1] |
| Product Desc. |
hypothetical protein[2]; predicted DNA-binding transcriptional regulator[3] Antitoxin for the YncN(HicA) mRNA interferase toxin; mutational suppressor of null rpoE lethality[4] |
| Product Synonyms(s) |
predicted DNA-binding transcriptional regulator[1], B1438[2][1], HicB[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(ydcQ) DNA display Protein display Pubmed(ydcQ) Textpresso(ydcQ) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
IS insertions in ydcQ were isolated as suppressors of rpoE lethality; in wt cells, ydcQ mutants downregulate extracytoplasmic stress responses and OM vesicle production is reduced (Button, 2006). A longer 145 aa translation is unlikely due to a poor RBS and a lack of seqeunce conservation.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.