phnD:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=phnD&s=search PortEco search(phnD)] [http://ecoliwiki.net/tools/display_dna.php?gene=phnD&loc=MG1655:4322375..4321359,W3110:4329030..4328014,REL606:4303166..4302150,DH10B:4422737..4421721,BW2952:4260094..4261110 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4260094&end=4261110&gene=phnD&aa= | [http://porteco.org/AjaxSearch.jsp?searchString=phnD&s=search PortEco search(phnD)] [http://ecoliwiki.net/tools/display_dna.php?gene=phnD&loc=MG1655:4322375..4321359,W3110:4329030..4328014,REL606:4303166..4302150,DH10B:4422737..4421721,BW2952:4260094..4261110 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4260094&end=4261110&gene=phnD&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=phnD+AND+escherichia+coli Pubmed(phnD)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=phnD Textpresso(phnD)] | ||
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Revision as of 00:27, 16 August 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
phnD |
|---|---|
| Gene Synonym(s) |
ECK4098, b4105, JW4066, psiD, phn[1] |
| Product Desc. |
Component of alkylphosphonate ABC transporter[2][3] Phosphonate uptake, periplasmic binding protein; ABC transporter[4] |
| Product Synonyms(s) |
phosphonate/organophosphate ester transporter subunit[1], periplasmic binding component of ABC superfamily[1], B4105[2][1], Phn[2][1], PsiD[2][1], PhnD[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): phnCDEEFGHIJKLMNOP[2], OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP |
| Regulation/Activity | |
| Quick Links |
PortEco search(phnD) DNA display Protein display Pubmed(phnD) Textpresso(phnD) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Phosphonate utilization is cryptic in K-12. PhnD binds 2-aminoethylphosphonate and other phosphonates. First 26 aa are predicted to be a type I signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.