matC:Quickview: Difference between revisions

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[http://porteco.org/AjaxSearch.jsp?searchString=matC&s=search PortEco search(matC)]    [http://ecoliwiki.net/tools/display_dna.php?gene=matC&loc=MG1655:309250..308582,W3110:309250..308582,DH10B:284800..284132,REL606:279540..280208 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=279540&end=280208&gene=matC&aa=mkkhllplallfsgispaqaldvgdissfmnsdsstlsktiknstdsgrlinirlerlssplddgqvismdkpdellltpaslllpaqasevirffykgpadekeryyrivwfdqalsdaqrdnanrsavatasarigtilvvaprqanyhfqyangsltntgnatlrilaygpclkaangkeckenyylmpgksrrftrvdtadnkgrvalwqgdkfipvk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=matC+AND+escherichia+coli Pubmed(matC)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=matC Textpresso(matC)]
[http://porteco.org/AjaxSearch.jsp?searchString=matC&s=search PortEco search(matC)]    [http://ecoliwiki.net/tools/display_dna.php?gene=matC&loc=MG1655:309250..308582,W3110:309250..308582,DH10B:284800..284132,REL606:279540..280208 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=279540&end=280208&gene=matC&aa= Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=matC+AND+escherichia+coli Pubmed(matC)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=matC Textpresso(matC)]


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Revision as of 23:11, 15 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

matC

Gene Synonym(s)

yagY, ECK0291, b0292, JW0286[1][2]

Product Desc.

predicted protein[3][2]

Cryptic gene, required for Mat fimbria in O18K1H7 strains[4]

Product Synonyms(s)

predicted protein[1], B0292[3][1], YagY[3][1], MatC[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yagV[3]

Regulation/Activity
Quick Links

PortEco search(matC)    DNA display    Protein display    Pubmed(matC)    Textpresso(matC)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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O18K1H7 matABC genes are required for Mat fimbria formation when cloned in K-12. matA mRNA was detected in K-12, but not matBC mRNA. First 20 aa are predicted to be a signal peptide.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.