fadJ:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Data loaded by TableEdit_Loader.
/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php
Line 265: Line 265:
|-  
|-  
|
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=48179 SUPERFAMILY:48179]
[http://pfam.janelia.org/family/PF00378 PF00378  Enoyl-CoA hydratase/isomerase family]
|
|
   
   
Line 281: Line 281:
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
|
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51735 SUPERFAMILY:51735]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=48179 SUPERFAMILY:48179]
|
|
   
   
Line 288: Line 288:
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
|
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52096 SUPERFAMILY:52096]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51735 SUPERFAMILY:51735]
|
|
   
   
|-  
|-  
|
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
|
|
[http://pfam.janelia.org/family/PF00378 PF00378  Enoyl-CoA hydratase/isomerase family]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52096 SUPERFAMILY:52096]
|
|
   
   

Revision as of 22:15, 15 August 2011

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010297 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000018050 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G29010 (score: 1.000; bootstrap: 100%)
  • AT3G06860 (score: 0.437)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000032860 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00033493 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020347 (score: 1.000; bootstrap: 100%)
  • WBGene00001150 (score: 0.745)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006377 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000012623 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2581 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040425-3528 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0028479 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18151-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000026633 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000288682 (score: 1.000; bootstrap: 99%)
  • ENSP00000339020 (score: 0.136)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000005853 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000021954 (score: 0.085)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019733 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2135593 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q6K7T9 (score: 1.000; bootstrap: 100%)
  • Q8W1L6 (score: 0.981)
  • Q94CN1 (score: 0.465)
  • Q6L4L7 (score: 0.387)
  • Q5WMY4 (score: 0.356)
  • Q60E84 (score: 0.124)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000020159 (score: 1.000; bootstrap: 99%)
  • ENSPTRP00000007920 (score: 0.142)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000002410 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000143533 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00035720001 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000049725 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000015010 (score: 0.201)
  • ENSXETP00000009021 (score: 0.113)

From Inparanoid:20070104

Shigella flexneri

S2554

From SHIGELLACYC

E. coli O157

Z3604

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

Pfam (EcoliWiki Page)

PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

Pfam (EcoliWiki Page)

PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

Pfam (EcoliWiki Page)

PF00378 Enoyl-CoA hydratase/isomerase family

Superfamily (EcoliWiki Page)

SUPERFAMILY:48179

Superfamily (EcoliWiki Page)

SUPERFAMILY:48179

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Superfamily (EcoliWiki Page)

SUPERFAMILY:52096


edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=fadJ:Evolution&oldid=1286805"