dmlA:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=dmlA&s=search PortEco search(dmlA)] [http://ecoliwiki.net/tools/display_dna.php?gene=dmlA&loc=MG1655:1879936..1881021,W3110:1883626..1884711,DH10B:1970507..1971592,REL606:1860490..1861575,BW2952:1771995..1773080 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1771995&end=1773080&gene=dmlA&aa= | [http://porteco.org/AjaxSearch.jsp?searchString=dmlA&s=search PortEco search(dmlA)] [http://ecoliwiki.net/tools/display_dna.php?gene=dmlA&loc=MG1655:1879936..1881021,W3110:1883626..1884711,DH10B:1970507..1971592,REL606:1860490..1861575,BW2952:1771995..1773080 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1771995&end=1773080&gene=dmlA&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dmlA+AND+escherichia+coli Pubmed(dmlA)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dmlA Textpresso(dmlA)] | ||
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Revision as of 21:56, 15 August 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
dmlA |
|---|---|
| Gene Synonym(s) |
yeaU, ECK1798, b1800, JW1789, ttuC[1] |
| Product Desc. |
predicted dehydrogenase[2]; D-malate dehydrogenase (decarboxylating)[3] D-malate oxidase, NAD-dependent; probable tartrate dehydrogenase[4] |
| Product Synonyms(s) |
predicted dehydrogenase[1], B1800[2][1], YeaU[2][1], TtuC[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(dmlA) DNA display Protein display Pubmed(dmlA) Textpresso(dmlA) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
AFMB Structural Genomics target No. 39 (http://afmb.cnrs-mrs.fr/article171.html). YeaU is 77% identical to a characterized tartrate dehydrogenase from Pseudomonas putida (SP:Q51945); this P. putida enzyme also has D-malate oxidase activity (Karsten, 2002). The D-malate oxidase activity of YeaU has been confirmed (Reed, 2006), but the probable tartrate dehydrogenase activity has not been tested. Mutations in yeaT or dmlA block growth on D-malate (Reed, 2006). After four hours of Zn(II) stress, protein levels increased (Easton, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.