bssS:Quickview: Difference between revisions

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[http://porteco.org/AjaxSearch.jsp?searchString=bssS&s=search PortEco search(bssS)]    [http://ecoliwiki.net/tools/display_dna.php?gene=bssS&loc=MG1655:1120178..1119924,W3110:1122532..1122278,DH10B:1175623..1175369,REL606:1135270..1135524,BW2952:1023849..1024103 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1023849&end=1024103&gene=bssS&aa=meknneviqthplvgwdistvdsydalmlrlhyqtpnkseqegtevgqtlwlttdvarqfisileagiakiesgdfqvneyrrh Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bssS+AND+escherichia+coli Pubmed(bssS)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=bssS Textpresso(bssS)]
[http://porteco.org/AjaxSearch.jsp?searchString=bssS&s=search PortEco search(bssS)]    [http://ecoliwiki.net/tools/display_dna.php?gene=bssS&loc=MG1655:1120178..1119924,W3110:1122532..1122278,DH10B:1175623..1175369,REL606:1135270..1135524,BW2952:1023849..1024103 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1023849&end=1024103&gene=bssS&aa= Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bssS+AND+escherichia+coli Pubmed(bssS)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=bssS Textpresso(bssS)]


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Revision as of 21:33, 15 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

bssS

Gene Synonym(s)

yceP, ECK1045, b1060, JW5152[1][2]

Product Desc.

regulator of biofilm formation[2][3]

Repressor of biofilm formation by indole transport regulation; global regulator, e.g. of AI-2 transport and motility genes; cold shock gene[4]

Product Synonyms(s)

predicted protein[1], B1060[2][1], YceP[2][1], BssS[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): bssS[2], yceP

Regulation/Activity
Quick Links

PortEco search(bssS)    DNA display    Protein display    Pubmed(bssS)    Textpresso(bssS)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Increases Mtr expression and indole import; decreases AcrEF expression and indole export. yceP is induced three hours after cold shock in a pnp-dependent manner. Induced during biofilm formation.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.