tomB:Quickview: Difference between revisions

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[http://porteco.org/AjaxSearch.jsp?searchString=tomB&s=search PortEco search(tomB)]    [http://ecoliwiki.net/tools/display_dna.php?gene=tomB&loc=MG1655:479932..479558,W3110:479932..479558,BW2952:382317..382691 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=382317&end=382691&gene=tomB&aa=mdeyspkrhdiaqlkflcetlyhdclanleesnhgwvndptsainlqlneliehiatfalnykikynednklieqideylddtfmlfssyginmqdlqkwrksgnrlfrcfvnatkenpaslsc Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tomB+AND+escherichia+coli Pubmed(tomB)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=tomB Textpresso(tomB)]
[http://porteco.org/AjaxSearch.jsp?searchString=tomB&s=search PortEco search(tomB)]    [http://ecoliwiki.net/tools/display_dna.php?gene=tomB&loc=MG1655:479932..479558,W3110:479932..479558,BW2952:382317..382691 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=382317&end=382691&gene=tomB&aa=mdeyspkrhdiaqlkflcetlyhdclanleesnhgwvndptsainlqlneliehiatfalnykikynednklieqideylddtfmlfssyginmqdlqkwrksgnrlfrcfvnatkenpaslsc Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tomB+AND+escherichia+coli Pubmed(tomB)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tomB Textpresso(tomB)]


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Revision as of 18:30, 27 June 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

tomB

Gene Synonym(s)

ECK0455, b0461, JW0450, ybaJ[1]

Product Desc.

predicted protein[2][3]

Identified initially as upregulated 37-fold in biofilms[4] and shown to influence biofilm formation[5].

Toxin overexpression modulator: antitoxin for toxin Hha[6].

Product Synonyms(s)

predicted protein[1], B0461[2][1], YbaJ[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links

PortEco search(tomB)    DNA display    Protein display    Pubmed(tomB)    Textpresso(tomB)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ Ren, D et al. (2004) Gene expression in Escherichia coli biofilms. Appl. Microbiol. Biotechnol. 64 515-24 PubMed
  5. ↑ Barrios, AF et al. (2006) Hha, YbaJ, and OmpA regulate Escherichia coli K12 biofilm formation and conjugation plasmids abolish motility. Biotechnol. Bioeng. 93 188-200 PubMed
  6. ↑ García-Contreras, R et al. (2008) Protein translation and cell death: the role of rare tRNAs in biofilm formation and in activating dormant phage killer genes. PLoS ONE 3 e2394 PubMed