fadJ:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
touch QV table
touch QV table
Line 65: Line 65:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://porteco.org/AjaxSearch.jsp?searchString=fadJ&s=search PortEco search(fadJ)]    [http://ecoliwiki.net/tools/display_dna.php?gene=fadJ&loc=MG1655:2457181..2455037,W3110:2464605..2462461,DH10B:2548946..2546802,REL606:2400679..2402823,BW2952:2340842..2342986 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2340842&end=2342986&gene=fadJ&aa=memtsaftlnvrldniavitidvpgekmntlkaefasqvraiikqlrenkelrgvvfvsakpdnfiagadinmigncktaqeaealarqgqqlmaeihalpiqviaaihgaclggglelalachgrvctddpktvlglpevqlgllpgsggtqrlprligvstalemiltgkqlrakqalklglvddvvphsilleaavelakkerpssrplpvrerilagplgrallfkmvgkktehktqgnypaterilevvetglaqgtssgydaearafgelamtpqsqalrsiffastdvkkdpgsdappaplnsvgilggglmgggiayvtackagipvrikdinpqginhalkyswdqlegkvrrrhlkaserdkqlalisgttdyrgfahrdliieavfenlelkqqmvaeveqncaahtifasntsslpigdiaahatrpeqviglhffspvekmplveiiphagtsaqtiattvklakkqgktpivvrdkagfyvnrilapyineairmltqgervehidaalvkfgfpvgpiqlldevgidtgtkiipvleaaygerfsapanvvssilnddrkgrkngrgfylygqkgrkskkqvdpaiypligtqgqgrisapqvaercvmlmlneavrcvdeqvirsvrdgdigavfgigfppflggpfryidslgagevvaimqrlatqygsrftpcerlvemgargesfwkttatdlq Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fadJ+AND+escherichia+coli Pubmed(fadJ)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=fadJ Textpresso(fadJ)]
[http://porteco.org/AjaxSearch.jsp?searchString=fadJ&s=search PortEco search(fadJ)]    [http://ecoliwiki.net/tools/display_dna.php?gene=fadJ&loc=MG1655:2457181..2455037,W3110:2464605..2462461,DH10B:2548946..2546802,REL606:2400679..2402823,BW2952:2340842..2342986 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2340842&end=2342986&gene=fadJ&aa=memtsaftlnvrldniavitidvpgekmntlkaefasqvraiikqlrenkelrgvvfvsakpdnfiagadinmigncktaqeaealarqgqqlmaeihalpiqviaaihgaclggglelalachgrvctddpktvlglpevqlgllpgsggtqrlprligvstalemiltgkqlrakqalklglvddvvphsilleaavelakkerpssrplpvrerilagplgrallfkmvgkktehktqgnypaterilevvetglaqgtssgydaearafgelamtpqsqalrsiffastdvkkdpgsdappaplnsvgilggglmgggiayvtackagipvrikdinpqginhalkyswdqlegkvrrrhlkaserdkqlalisgttdyrgfahrdliieavfenlelkqqmvaeveqncaahtifasntsslpigdiaahatrpeqviglhffspvekmplveiiphagtsaqtiattvklakkqgktpivvrdkagfyvnrilapyineairmltqgervehidaalvkfgfpvgpiqlldevgidtgtkiipvleaaygerfsapanvvssilnddrkgrkngrgfylygqkgrkskkqvdpaiypligtqgqgrisapqvaercvmlmlneavrcvdeqvirsvrdgdigavfgigfppflggpfryidslgagevvaimqrlatqygsrftpcerlvemgargesfwkttatdlq Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fadJ+AND+escherichia+coli Pubmed(fadJ)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fadJ Textpresso(fadJ)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 18:14, 27 June 2011

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

fadJ

Gene Synonym(s)

yfcX, ECK2335, b2341, JW2338[1][2]

Product Desc.

FadJ[2][3];

Component of fatty acid oxidation complex[3]

Multifunctional anaerobic fatty acid oxidation complex FadIJ; has 3-hydroxyacyl-CoA dehydrogenase and medium-long-chain-length enoyl-CoA hydratase activities; probable beta-hydroxybutyryl-CoA epimerase and dodecenoyl-CoA-delta-isomerase[4]

Product Synonyms(s)

fused enoyl-CoA hydratase and epimerase and isomerase[1], 3-hydroxyacyl-CoA dehydrogenase[1], B2341[2][1], FadJ[2][1], YfcX[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fadIJ[2]

Regulation/Activity
Quick Links

PortEco search(fadJ)    DNA display    Protein display    Pubmed(fadJ)    Textpresso(fadJ)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Also known as beta-oxidation complex II. FadR regulon. FadIJ are in a high MW complex. FadAB and FadIJ are paralogs.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.