dctR:Quickview: Difference between revisions
touch QV table |
touch QV table |
||
| Line 63: | Line 63: | ||
!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
|| | || | ||
[http://porteco.org/AjaxSearch.jsp?searchString=dctR&s=search PortEco search(dctR)] [http://ecoliwiki.net/tools/display_dna.php?gene=dctR&loc=MG1655:3652706..3653236,W3110:3985732..3985202,BW2952:3541200..3541730 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3541200&end=3541730&gene=dctR&aa=mfliitrdtmfftamknilskgnvvhiqneeeidvmlhqnafviidtlmnnvfhsnfltqierlkpvhviifspfnikrclgkvpvtfvprtitiidfvalingsycsvpeaavslsrkqhqvlscianqmttedileklkislktfychkhnimmilnlkrinelvrhqhidylv Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dctR+AND+escherichia+coli Pubmed(dctR)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=dctR&s=search PortEco search(dctR)] [http://ecoliwiki.net/tools/display_dna.php?gene=dctR&loc=MG1655:3652706..3653236,W3110:3985732..3985202,BW2952:3541200..3541730 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3541200&end=3541730&gene=dctR&aa=mfliitrdtmfftamknilskgnvvhiqneeeidvmlhqnafviidtlmnnvfhsnfltqierlkpvhviifspfnikrclgkvpvtfvprtitiidfvalingsycsvpeaavslsrkqhqvlscianqmttedileklkislktfychkhnimmilnlkrinelvrhqhidylv Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dctR+AND+escherichia+coli Pubmed(dctR)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dctR Textpresso(dctR)] | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 18:13, 27 June 2011
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
dctR |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
protein involved in metabolism of C4-dicarboxylates[2]; predicted DNA-binding transcriptional regulator[3] Probable repressor of dctA dicarboxylate transporter gene[4] |
| Product Synonyms(s) |
predicted DNA-binding ranscriptional regulator[1], B3507[2][1], DctR[2][1], YhiF[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(dctR) DNA display Protein display Pubmed(dctR) Textpresso(dctR) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
DctR is in the EvgAS regulon. Mutation reverses succinate growth defect of an atp operon deletion, as does a DctA overproducer. Overproduced DctR blocks growth on succinate, presumably by repressing dctA. Overexpression of DctR causes filamentous biofilm formation. DctR is a member of the LuxR family of regulatory proteins and is homologous to the DctR response regulator of R. capsulatus. DctR is possibly involved in the regulation of type III secretion systems in enterohemorrhagic E. coli O157:H7.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.