fimC:Quickview: Difference between revisions
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[http://ecoliwiki.net/tools/display_dna.php?gene=fimC&loc=MG1655:4542327..4543052,W3110:4548984..4549709,REL606:4525218..4525943,BW2952:4480812..4481537 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4480812&end=4481537&gene=fimC&aa=msnknvnvrksqeitfcllagilmfmammvagraeagvalgatrviypagqkqeqlavtnndenstyliqswvenadgvkdgrfivtpplfamkgkkentlrildatnnqlpqdreslfwmnvkaipsmdkskltentlqlaiisriklyyrpaklalppdqaaeklrfrrsansltlinptpyyltvtelnagtrvlenalvppmgestvklpsdagsnityrtindygaltpkmtgvme Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fimC+AND+escherichia+coli Pubmed(fimC)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=fimC Textpresso(fimC)] | [http://porteco.org/AjaxSearch.jsp?searchString=fimC&s=search PortEco search(fimC)] [http://ecoliwiki.net/tools/display_dna.php?gene=fimC&loc=MG1655:4542327..4543052,W3110:4548984..4549709,REL606:4525218..4525943,BW2952:4480812..4481537 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4480812&end=4481537&gene=fimC&aa=msnknvnvrksqeitfcllagilmfmammvagraeagvalgatrviypagqkqeqlavtnndenstyliqswvenadgvkdgrfivtpplfamkgkkentlrildatnnqlpqdreslfwmnvkaipsmdkskltentlqlaiisriklyyrpaklalppdqaaeklrfrrsansltlinptpyyltvtelnagtrvlenalvppmgestvklpsdagsnityrtindygaltpkmtgvme Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fimC+AND+escherichia+coli Pubmed(fimC)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=fimC Textpresso(fimC)] | ||
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Revision as of 08:11, 27 May 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
fimC |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
periplasmic chaperone, required for type 1 fimbriae[2][3] Periplasmic chaperone for type 1 fimbriae; FimCD chaperone-usher transport[4] |
| Product Synonyms(s) |
chaperone, periplasmic[1], B4316[2][1], PilC[2][1], PilB[2][1], FimC[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): fimAICDFGH[2] |
| Regulation/Activity | |
| Quick Links |
PortEco search(fimC) DNA display Protein display Pubmed(fimC) Textpresso(fimC) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
FimC has Ig-like domains: pfam PF00345 aligns to N-terminal residues 37-157, and pfam PF02753 aligns to C-terminal residues 161-237. First 36 aa are a type I signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.