csgD:Quickview: Difference between revisions
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[http://ecoliwiki.net/tools/display_dna.php?gene=csgD&loc=MG1655:1102419..1101769,W3110:1103437..1102787,DH10B:1157864..1157214,REL606:1117765..1117115,BW2952:1005694..1006344 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1005694&end=1006344&gene=csgD&aa=mfnevhsihghtlllitksslqatallqhlkqslaitgklhniqrslddissgsiilldmmeadkklihywqdtlsrknnnikilllntpedypyrdienwphingvfysmedqervvnglqgvlrgecyftqklasylithsgnyrynstesallthrekeilnklrigasnneiarslfisentvkthlynlfkkiavknrtqavswandnlrr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=csgD+AND+escherichia+coli Pubmed(csgD)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=csgD Textpresso(csgD)] | [http://porteco.org/AjaxSearch.jsp?searchString=csgD&s=search PortEco search(csgD)] [http://ecoliwiki.net/tools/display_dna.php?gene=csgD&loc=MG1655:1102419..1101769,W3110:1103437..1102787,DH10B:1157864..1157214,REL606:1117765..1117115,BW2952:1005694..1006344 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1005694&end=1006344&gene=csgD&aa=mfnevhsihghtlllitksslqatallqhlkqslaitgklhniqrslddissgsiilldmmeadkklihywqdtlsrknnnikilllntpedypyrdienwphingvfysmedqervvnglqgvlrgecyftqklasylithsgnyrynstesallthrekeilnklrigasnneiarslfisentvkthlynlfkkiavknrtqavswandnlrr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=csgD+AND+escherichia+coli Pubmed(csgD)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=csgD Textpresso(csgD)] | ||
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Revision as of 07:56, 27 May 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
csgD |
|---|---|
| Gene Synonym(s) |
ECK1026, b1040, JW1023[1] |
| Product Desc. |
CsgD transcriptional activator[2]; CsgD transcriptional dual regulator[3] Transcriptional activator for csgBA and other genes[4] |
| Product Synonyms(s) |
DNA-binding transcriptional activator in two-component regulatory system[1], B1040[2][1], CsgD[2][1], PP 2-component transcriptional regulator for 2nd curli operon[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(csgD) DNA display Protein display Pubmed(csgD) Textpresso(csgD) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
CsgD (AgfD) has also been characterized in Salmonella. CsgD increases expression of glyA. csgD insertions eliminate RpoS-dependent transcription from the csgBA promoter. Cytoplasmic membrane-associated.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.