nrdR:Quickview: Difference between revisions
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[http://ecoliwiki.net/tools/display_dna.php?gene=nrdR&loc=MG1655:432226..432675,W3110:432226..432675,DH10B:371557..372006 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start= | [http://ecoliwiki.net/tools/display_dna.php?gene=nrdR&loc=MG1655:432226..432675,W3110:432226..432675,DH10B:371557..372006,BW2952:334985..335434 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=334985&end=335434&gene=nrdR&aa=mhcpfcfavdtkvidsrlvgegssvrrrrqclvcnerfttfevaelvmprvvksndvrepfneeklrsgmlralekrpvssddvemainhiksqlratgerevpskmignlvmeqlkkldkvayirfasvyrsfedikefgeeiarled Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nrdR+AND+escherichia+coli Pubmed(nrdR)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=nrdR Textpresso(nrdR)] | ||
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Revision as of 15:41, 12 April 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
nrdR |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Nrd regulon repressor[4] |
| Product Synonyms(s) | |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
NrdR has been shown to regulate all three Nrd systems and to bind to the predicted NrdR binding sites (Torrents, 2007). Homologous to S. coelicolor NrdR (Borovok, 2004). Predicted binding sites has been reported for the nrdAB, nrdDG, and nrdHIEF operons (Rodionova, 2005). This corresponds to putative TF Binding SIte Cluster E581 for nrdD and nrdA (Qin, 2003). Binds TrxA (Kumar, 2004). First gene in putative nrdR-ribDE-nusB operon. Also refered to as nrdR in an unpublished comparative analysis (Borovok, 2005, in GenBank AM076828).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.