truA:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55120 SUPERFAMILY:55120]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55120 SUPERFAMILY:55120]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01416 PF01416  tRNA pseudouridine synthase] 
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Revision as of 19:00, 26 October 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014976 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000034996 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G09800 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000010018 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00024264 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00006473 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000028470 (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000010018 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000018388 (score: 0.189)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041212-26 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041212-30 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218427 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0038811 (score: 1.000; bootstrap: 52%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20054-PA (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000002628 (score: 1.000; bootstrap: 71%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000303329 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000010016 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1929237 (score: 1.000; bootstrap: 62%)

From Inparanoid:20070104

Oryza gramene

  • Q6ESS0 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000000037 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000034280 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YFL001W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC25B85 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000181297 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00006401001 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000014797 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

TRUA

From SHIGELLACYC

E. coli O157

TRUA

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR11142:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:55120

Pfam (EcoliWiki Page)

PF01416 tRNA pseudouridine synthase



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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