glgX:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=81296 SUPERFAMILY:81296]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=81296 SUPERFAMILY:81296]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02922 PF02922  Carbohydrate-binding module 48 (Isoamylase N-terminal domain)] 
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Revision as of 18:58, 26 October 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT2G39930 (score: 1.000; bootstrap: 99%)
  • AT4G09020 (score: 0.174)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000007671 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • O80403 (score: 1.000; bootstrap: 99%)
  • Q84L53 (score: 0.993)
  • Q8VWN0 (score: 0.818)
  • Q8W547 (score: 0.818)
  • Q7XA16 (score: 0.814)
  • Q8VWM3 (score: 0.813)
  • Q7XA15 (score: 0.812)
  • Q8LKZ7 (score: 0.807)
  • Q8VWM4 (score: 0.804)
  • O22637 (score: 0.796)
  • Q41742 (score: 0.784)
  • Q9XFG6 (score: 0.605)
  • Q8W546 (score: 0.290)
  • Q8LKZ6 (score: 0.255)
  • Q9XFG7 (score: 0.242)
  • Q84UE5 (score: 0.170)
  • Q6K4A4 (score: 0.169)
  • Q5FBD0 (score: 0.159)
  • Q8LKZ5 (score: 0.105)

From Inparanoid:20070104

Shigella flexneri

GLGX

From SHIGELLACYC

E. coli O157

GLGX

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:51445

Panther (EcoliWiki Page)

PTHR10357:SF74

Superfamily (EcoliWiki Page)

SUPERFAMILY:81296

Pfam (EcoliWiki Page)

PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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