GenoBase: Difference between revisions

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!align=left |Link/URL:
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[http://ecoli.naist.jp/GB6/search.jsp GenoBase]
[http://ecoli.aist-nara.ac.jp/GB5/search.jsp GenoBase]
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!align=left |What:
!align=left {{table heading style}} |What:
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Public repository for Sequence Information, Proteome, Transcriptome, Bioinformatics, and Knowledge based on literature concerning E. coli.  
Public repository for Sequence Information, Proteome, Transcriptome, Bioinformatics, and Knowledge based on literature concerning E. coli.  
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!align=left |Who:
!align=left {{table heading style}} |Who:
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Nara Institute of Science and Technology (Japan)
Nara Institute of Science and Technology (Japan)
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!align=left |Updates:
!align=left {{table heading style}} |Updates:
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!align=left |Upcoming events:
!align=left {{table heading style}} |Upcoming events:
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!align=left |Web Services:
!align=left {{table heading style}} |Web Services:
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Revision as of 00:11, 23 May 2010

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Link/URL:

GenoBase

What:

Public repository for Sequence Information, Proteome, Transcriptome, Bioinformatics, and Knowledge based on literature concerning E. coli.

Who:

Nara Institute of Science and Technology (Japan)

Updates:
Upcoming events:
Web Services:



About GenoBase

Home Page

Genebase is the sequencing database for E.coli W3110.

Content

genomic sequence
ORF clones
tagged protein expression and purification
overexpression screening (toxicity effects, etc.)
transcriptome
RNAs and other sequence elements
Localization info (GFP tagged proteins)

Various clone libraries
Keio clones
ASKA clones
Kohara phage clones

Using GenoBase

Browsing

Searching

query by JW# (http://ecoli.aist-nara.ac.jp/GB5/info.jsp?id=JW1840)

Search by keyword (gene name) or by homology (blast)

'Resources
Genome sequence
Genes ORFs
tRNA/rRNA/ otherRNAs
Sequence elements
Kohara clones
ASKA library
Keio collection

Usage examples

Add links to additional pages describing success stories here.

Other sites with related content

Technology

Web Services/API

Discussion

References

External Links

GenoBase

Discussion of GenoBase on other websites