casA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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In E. coli K12 transcription of casA is cryptic through silencing by H-NS .
In E. coli K12 transcription of casA is cryptic through silencing by H-NS <ref name='PMID:20132443'/>.
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links

Revision as of 10:59, 31 March 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

casA

Gene Synonym(s)

ECK2755, b2760, JW2730, ygcL[1]

Product Desc.

predicted protein[2][3]

Function unknown; baeSR regulon; homologous to human TRRAP protein, phosphatidylinositol kinases and DNA-dependent protein kinases[4]

Product Synonyms(s)

predicted protein[1], B2760[2][1], YgcL[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygbF[2]

Regulation/Activity

In E. coli K12 transcription of casA is cryptic through silencing by H-NS [5].

Quick Links

DNA display    Protein display    Pubmed(ygcL)    Textpresso(ygcL)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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casA, as the other Cascade genes, is transcribed from a single promoter, which is silenced by H-NS [5].




References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 Pul, U et al. (2010) Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS. Mol. Microbiol. 75 1495-512 PubMed