casA:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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In E. coli K12 transcription of casA is cryptic through silencing by H-NS . | |||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ygcL&loc=MG1655:2882160..2880652,W3110:2882794..2881286,DH10B:2974702..2973194 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start= | [http://ecoliwiki.net/tools/display_dna.php?gene=ygcL&loc=MG1655:2882160..2880652,W3110:2882794..2881286,DH10B:2974702..2973194,BW2952:2766464..2767972 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2766464&end=2767972&gene=ygcL&aa=mnllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfpneshtenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkekftftvnglwphphspclvtvkkgeveekflafttsapswtqisrvvvdkiiqnengnrvaavvnqfrniapqsplelimggyrnnqasilerrhdvlmfnqgwqqygnvineivtvglgyktalrkalytfaegfknkdfkgagvsvhetaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahhpklistlalaratlykhlrelkpqggpsng Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygcL+AND+escherichia+coli Pubmed(ygcL)] [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ygcL Textpresso(ygcL)] | ||
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Revision as of 10:58, 31 March 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
casA |
|---|---|
| Gene Synonym(s) |
ECK2755, b2760, JW2730, ygcL[1] |
| Product Desc. |
Function unknown; baeSR regulon; homologous to human TRRAP protein, phosphatidylinositol kinases and DNA-dependent protein kinases[4] |
| Product Synonyms(s) | |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity |
In E. coli K12 transcription of casA is cryptic through silencing by H-NS . |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
casA, as the other Cascade genes, is transcribed from a single promoter, which is silenced by H-NS [5].
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Pul, U et al. (2010) Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS. Mol. Microbiol. 75 1495-512 PubMed