rsmE:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rsmE&loc=MG1655:3089156..3089887,W3110:3089790..3090521,REL606:2976885..2977616 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2976885&end=2977616&gene=rsmE&aa=mgrrrgfltmripriyhpepltshshialcedaanhigrvlrmgpgqalqlfdgsnqvfdaeitsaskksvevkvlegqiddresplhihlgqvmsrgekmeftiqksielgvslitplfsercgvkldserlnkklqqwqkiaiaaceqcgrnrvpeirpamdleawcaeqdeglklnlhprasnsintlplpvervrlligpegglsadeiamtaryqftdillgprvlrtettaltaitalqvrfgdlg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsmE+AND+escherichia+coli Pubmed(rsmE)] [http://trimer.tamu.edu/cgi-bin/textpresso/ | [http://ecoliwiki.net/tools/display_dna.php?gene=rsmE&loc=MG1655:3089156..3089887,W3110:3089790..3090521,REL606:2976885..2977616 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2976885&end=2977616&gene=rsmE&aa=mgrrrgfltmripriyhpepltshshialcedaanhigrvlrmgpgqalqlfdgsnqvfdaeitsaskksvevkvlegqiddresplhihlgqvmsrgekmeftiqksielgvslitplfsercgvkldserlnkklqqwqkiaiaaceqcgrnrvpeirpamdleawcaeqdeglklnlhprasnsintlplpvervrlligpegglsadeiamtaryqftdillgprvlrtettaltaitalqvrfgdlg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsmE+AND+escherichia+coli Pubmed(rsmE)] [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=rsmE Textpresso(rsmE)] | ||
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Revision as of 22:28, 2 March 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rsmE |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
16S rRNA m(3)U1498 methyltransferase[2]; 16S rRNA m3U1498 methyltransferase[3] 16S rRNA m(3)U1498 methyltransferase, SAM-dependent[4] |
| Product Synonyms(s) | |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YggJ is RsmE; although growth is not obviously impaired, wildtype outcompetes rsmE- (Basturea, 2006). Member of the m(3)U MTases family DUF558 and the SAM MTase alpha/beta knot superfamily. Exponential reduction in cell growth only observed when co-cultured with wild type. The N-terminal domain (1-72) resembles an RNA binding domain. RrmA and YibK are structural paralogs. otherPDB (H. influenzae): 1NXZ, 1VHX. AFMB Structural Genomics target No. 129 (http://afmb.cnrs-mrs.fr/article171.html).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.