cydB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005506 iron ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0009055 electron carrier activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0020037 heme binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0017004 cytochrome complex assembly ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype

Revision as of 19:45, 2 February 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

cydB

Gene Synonym(s)

ECK0722, b0734, JW0723, cyd-2[1]

Product Desc.

cytochrome bd-I terminal oxidase subunit II[2][3];

Component of cytochrome bd-I terminal oxidase[2][3]

Cytochrome d (bd-I) terminal oxidase subunit II; upregulated in biofilms and microaerobic conditions; aerobically repressed by H-NS; anaerobically repressed by Fnr[4]

Product Synonyms(s)

cytochrome d terminal oxidase, subunit II[1], B0734[2][1], CydB[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cydAB[2], OP00140

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(cydB)    Textpresso(cydB)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Fnr and ArcA regulons. ArcA-P antagonizes H-NS repression of cydAB in response to limiting oxygen.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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