nemR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''nemR'' | ''nemR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1645, b1649, JW5874'', ydhM<ref name='LIB:Riley_2006'/> | ''ECK1645, b1649, JW5874'', ydhM<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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hypothetical protein<ref name='LIB:EcoCyc10.6'/>; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/>. YdhM binding to the <em>ydhM-nemA</em> promoter is reduced by addition of NEM. Genomic SELEX identifies a binding site for YdhM in the <em>ydhM-nemA</em> promoter region. <ref name='PMID:18567656'/> | hypothetical protein<ref name='LIB:EcoCyc10.6'/>; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/>. YdhM binding to the <em>ydhM-nemA</em> promoter is reduced by addition of NEM. Genomic SELEX identifies a binding site for YdhM in the <em>ydhM-nemA</em> promoter region. <ref name='PMID:18567656'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1649<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1649<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
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!align=left {{table_heading_style}} |Regulation/Activity | |||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=nemR&loc=MG1655:1724131..1724646,W3110:1727821..1728336 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1727821&end=1728336&gene=nemR&aa=mnkhtehdtrehllatgeqlclqrgftgmglsellktaevpkgsfyhyfrskeafgvamlerhyaayhqrltellqsgegnyrdrilayyqqtlnqfcqhgtisgcltvklsaevcdlsedmrsamdkgargviallsqalengrenhcltfcgeplqqaqvlyalwlganlqakisrsfeplenalahvkniiatpav Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nemR+AND+escherichia+coli Pubmed(nemR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nemR Textpresso(nemR)] | |||
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Revision as of 00:32, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
nemR |
|---|---|
| Gene Synonym(s) |
ECK1645, b1649, JW5874, ydhM[1] |
| Product Desc. |
hypothetical protein[2]; predicted DNA-binding transcriptional regulator[3]. YdhM binding to the ydhM-nemA promoter is reduced by addition of NEM. Genomic SELEX identifies a binding site for YdhM in the ydhM-nemA promoter region. [4] |
| Product Synonyms(s) |
predicted DNA-binding transcriptional regulator[1], B1649[2][1], YdhM[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Umezawa, Y et al. (2008) The uncharacterized transcription factor YdhM is the regulator of the nemA gene, encoding N-ethylmaleimide reductase. J. Bacteriol. 190 5890-7 PubMed