ubiB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ubiB'' | ''ubiB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3829, b3835, JW3812, aarF, yigQ, yigS, yigR, yigQ12, yigQRS''<ref name='LIB:Riley_2006'/> | ''ECK3829, b3835, JW3812, aarF, yigQ, yigS, yigR, yigQ12, yigQRS''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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2-OCTAPRENYLPHENOL- | 2-OCTAPRENYLPHENOL- | ||
Required for octaprenylphenol hydroxylation, the first step of ubiquinone synthesis; regulator of 2'-N-acetyltransferase; member of the ABC1 family of putative protein kinases<ref name='LIB:EcoGene'/> | Required for octaprenylphenol hydroxylation, the first step of ubiquinone synthesis; regulator of 2'-N-acetyltransferase; member of the ABC1 family of putative protein kinases<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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2-octaprenylphenol hydroxylase<ref name='LIB:Riley_2006'/>, B3835<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AarF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 2-octaprenylphenol hydroxylase<ref name='LIB:Riley_2006'/>, B3835<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AarF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0019168 2-octaprenylphenol hydroxylase activity ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ubiE-yigP-ubiB|ubiE-yigP-ubiB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ubiE-yigP-ubiB|ubiE-yigP-ubiB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ubiB&loc=MG1655:4018249..4019889,W3110:3616455..3614815,REL606:3998697..4000337,DH10B:4117169..4118809 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4117169&end=4118809&gene=ubiB&aa=mtpgevrrlyfiirtflsygldelipkmritlplrlwryslfwmpnrhkdkllgerlrlalqelgpvwikfgqmlstrrdlfpphiadqlallqdkvapfdgklakqqieaamgglpveawfddfeikplasasiaqvhtarlksngkevvikvirpdilpvikadlkliyrlarwvprllpdgrrlrptevvreyektlidelnllresanaiqlrrnfedspmlyipevypdycsegmmvmeriygipvsdvaalekngtnmkllaergvqvfftqvfrdsffhadmhpgnifvsyehpenpkyigidcgivgslnkedkrylaenfiaffnrdyrkvaelhvdsgwvppdtnveefefairtvcepifekplaeisfghvllnlfntarrfnmevqpqlvllqktllyvegvgrqlypqldlwktakpfleswikdqvgipalvrafkekapfwvekmpelpelvydslrqgkylqhsvdkiarelqsnhvrqgqsryflgigatlvlsgtfllvsrpewglmpgwlmaggliawfvgwrktr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ubiB+AND+escherichia+coli Pubmed(ubiB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ubiB Textpresso(ubiB)] | |||
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Revision as of 00:32, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ubiB |
|---|---|
| Gene Synonym(s) |
ECK3829, b3835, JW3812, aarF, yigQ, yigS, yigR, yigQ12, yigQRS[1] |
| Product Desc. |
2-OCTAPRENYLPHENOL- Required for octaprenylphenol hydroxylation, the first step of ubiquinone synthesis; regulator of 2'-N-acetyltransferase; member of the ABC1 family of putative protein kinases[2] |
| Product Synonyms(s) |
2-octaprenylphenol hydroxylase[1], B3835[3][1], YigQ[3][1], YigS[3][1], AarF[3][1], YigR[3][1], UbiB[3][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): ubiE-yigP-ubiB[3] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
fre was previously mis-identified as ubiB[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7