gntX:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''gntX'' | ''gntX'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK3400, b3413, JW5691, yhgH''<ref name='LIB:Riley_2006'/> | ''ECK3400, b3413, JW5691, yhgH''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
protein involved in utilization of DNA as a carbon source<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | protein involved in utilization of DNA as a carbon source<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
Required for the utilization of DNA as a carbon source; H. influenzae competence protein ComF homolog<ref name='LIB:EcoGene'/> | Required for the utilization of DNA as a carbon source; H. influenzae competence protein ComF homolog<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system<ref name='LIB:Riley_2006'/>, B3413<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhgH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GntX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system<ref name='LIB:Riley_2006'/>, B3413<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhgH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GntX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:gntXY|gntXY]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:gntXY|gntXY]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=gntX&loc=MG1655:3542904..3543587,W3110:4095534..4094851,DH10B:3640649..3641332,REL606:3473547..3474230 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3473547&end=3474230&gene=gntX&aa=mlfirycslltykdehmltvpglcwlcrmplalghwgicsvcsratrtdktlcpqcglpathshlpcgrclqkpppwqrlvtvadyapplsplihqlkfsrrseiasalsrllllevlharrttglqlpdrivsvplwqrrhwrrgfnqsdllcqplsrwlhcqwdseavtrtratatqhflsarlrkrnlknafrlelpvqgrhmvivddvvttgstvaeiaqlllrngaaavqvwclcrtl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gntX+AND+escherichia+coli Pubmed(gntX)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gntX Textpresso(gntX)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:31, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gntX |
|---|---|
| Gene Synonym(s) |
ECK3400, b3413, JW5691, yhgH[1] |
| Product Desc. |
protein involved in utilization of DNA as a carbon source[2][3] Required for the utilization of DNA as a carbon source; H. influenzae competence protein ComF homolog[4] |
| Product Synonyms(s) |
gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system[1], B3413[2][1], YhgH[2][1], GntX[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
gntX does not have a role in gluconate metabolism (Personal communication, T.Conway, personal communication, 2000). gntX is predicted to have a CRP-S promoter co-regulated by both Crp and Sxy (Cameron, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.