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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yggX''  
''yggX''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2957, b2962, JW2929''<ref name='LIB:Riley_2006'/>
''ECK2957, b2962, JW2929''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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protein that protects iron-sulfur proteins against oxidative damage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
protein that protects iron-sulfur proteins against oxidative damage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Confers protection of iron-sulfur proteins against oxidative damage; paraquat resistance<ref name='LIB:EcoGene'/>
Confers protection of iron-sulfur proteins against oxidative damage; paraquat resistance<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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protein that protects iron-sulfur proteins against oxidative damage<ref name='LIB:Riley_2006'/>, B2962<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
protein that protects iron-sulfur proteins against oxidative damage<ref name='LIB:Riley_2006'/>, B2962<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:mutY-yggX-mltC|mutY-yggX-mltC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:mutY-yggX|mutY-yggX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yggX-mltC|yggX-mltC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yggX|yggX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yggX-mltC-nupG|yggX-mltC-nupG]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:mutY-yggX-mltC-nupG|mutY-yggX-mltC-nupG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:mutY-yggX-mltC|mutY-yggX-mltC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:mutY-yggX|mutY-yggX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yggX-mltC|yggX-mltC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yggX|yggX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yggX-mltC-nupG|yggX-mltC-nupG]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:mutY-yggX-mltC-nupG|mutY-yggX-mltC-nupG]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yggX&loc=MG1655:3102115..3102390,W3110:3102749..3103024,DH10B:3197184..3197459,REL606:2989754..2990029 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2989754&end=2990029&gene=yggX&aa=msrtifctflqreaegqdfqlypgelgkriyneiskeawaqwqhkqtmlinekklnmmnaehrklleqemvnflfegkevhiegytpedkk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yggX+AND+escherichia+coli Pubmed(yggX)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yggX Textpresso(yggX)]


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Revision as of 00:30, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yggX

Gene Synonym(s)

ECK2957, b2962, JW2929[1]

Product Desc.

protein that protects iron-sulfur proteins against oxidative damage[2][3]

Confers protection of iron-sulfur proteins against oxidative damage; paraquat resistance[4]

Product Synonyms(s)

protein that protects iron-sulfur proteins against oxidative damage[1], B2962[2][1], YggX[2][1]

Function from GO

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): mutY-yggX-mltC[2], mutY-yggX[2], yggX-mltC[2], yggX[2], yggX-mltC-nupG[2], mutY-yggX-mltC-nupG[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(yggX)    Textpresso(yggX)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


SoxRS regulon. Cys7 is essential for YggX function in Salmonella; Salmonella YggX is involved in Fe(II) trafficking, but does not bind iron. otherPDB (S. typhimurium): 1XS8.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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