cmoB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''cmoB'' | ''cmoB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yecP, ECK1872, b1871, JW1860''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ''yecP, ECK1872, b1871, JW1860''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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putative enzyme<ref name='LIB:EcoCyc10.6'/>; predicted S-adenosyl-L-methionine-dependent methyltransferase<ref name='LIB:EcoCyc11.1'/> | putative enzyme<ref name='LIB:EcoCyc10.6'/>; predicted S-adenosyl-L-methionine-dependent methyltransferase<ref name='LIB:EcoCyc11.1'/> | ||
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tRNA(mo5U34)methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | tRNA(mo5U34)methyltransferase, SAM-dependent<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted S-adenosyl-L-methionine-dependent methyltransferase<ref name='LIB:Riley_2006'/>, B1871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YecP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CmoB<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | predicted S-adenosyl-L-methionine-dependent methyltransferase<ref name='LIB:Riley_2006'/>, B1871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YecP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CmoB<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yecN|yecN]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yecN|yecN]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=cmoB&loc=MG1655:1951466..1952437,W3110:1955156..1956127,REL606:1932212..1933183 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1932212&end=1933183&gene=cmoB&aa=midfgnfysliaknhlshwletlpaqianwqreqqhglfkqwsnaveflpeikpyrldllhsvtaeseeplsagqikrietlmrnlmpwrkgpfslygvnidtewrsdwkwdrvlphlsdltgrtildvgcgsgyhmwrmigagahlavgidptqlflcqfeavrkllgndqrahllplgieqlpalkafdtvfsmgvlyhrrsplehlwqlkdqlvnegelvletlvidgdentvlvpgdryaqmrnvyfipsalalknwlkkcgfvdiriadvsvttteeqrrtewmvtesladfldphdpgktvegypapkravliarkp Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cmoB+AND+escherichia+coli Pubmed(cmoB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cmoB Textpresso(cmoB)] | |||
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Revision as of 00:29, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cmoB |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
putative enzyme[3]; predicted S-adenosyl-L-methionine-dependent methyltransferase[2] tRNA(mo5U34)methyltransferase, SAM-dependent[4] |
| Product Synonyms(s) |
predicted S-adenosyl-L-methionine-dependent methyltransferase[1], B1871[3][1], YecP[3][1], CmoB[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
CmoB catalyzes an intermediate step in tRNA(cmo5U34) synthesis that forms uridine-5-oxyacetic acid (cmo5U) in tRNA. The cmoB ortholog is functionally characterized in S. typhimurium.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.