rfaI:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rfaI''  
''rfaI''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3617, b3627, JW3602, waaI, waaO''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK3617, b3627, JW3602, waaI, waaO''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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UDP-D-glucose:(glucosyl)LPS &alpha;-1,3-glucosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
UDP-D-glucose:(glucosyl)LPS &alpha;-1,3-glucosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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UDP-D-galactose: (glucosyl)LPS-1,3-D-galactosyltransferase<ref name='LIB:EcoGene'/>
UDP-D-galactose: (glucosyl)LPS-1,3-D-galactosyltransferase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase<ref name='LIB:Riley_2006'/>, B3627<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RfaI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UDP-D-galactose:(glucosyl)lipopolysaccharide-&alpha;-1,3-D-galactosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase<ref name='LIB:Riley_2006'/>, B3627<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RfaI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UDP-D-galactose:(glucosyl)lipopolysaccharide-&alpha;-1,3-D-galactosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rfaQGPSBIJYZK|rfaQGPSBIJYZK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rfaQGPSBIJYZK|rfaQGPSBIJYZK]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rfaI&loc=MG1655:3801081..3800062,W3110:3837357..3838376,DH10B:3898658..3897639 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3898658&end=3897639&gene=rfaI&aa=mqqvffqeteflnsvidydhkvetenlcldiaygtdknflfgcgisiasilkynegsrlcfhiftdyfgdddrkyfdalalqyktrikiylingdrlrslpstknwthaiyfrfviadyfinkapkvlyldadiicqgtieplinfsfpddkvamvvtegqadwwekrahslgvagiakgyfnsgfllintaqwaaqqvsaraiamlnepeiikkithpdqdvlnmlladklifadikyntqfslnyqlkesfinpvtndtifihyigptkpwhdwawdypvsqafmeaknaspwkntallkpnnsnqlrysakhmlkkhrylkgfsnylfyfiekikh Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rfaI+AND+escherichia+coli Pubmed(rfaI)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rfaI Textpresso(rfaI)]


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Revision as of 00:25, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rfaI

Gene Synonym(s)

ECK3617, b3627, JW3602, waaI, waaO[1][2]

Product Desc.

UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase[2][3]

UDP-D-galactose: (glucosyl)LPS-1,3-D-galactosyltransferase[4]

Product Synonyms(s)

UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase[1], B3627[2][1], WaaO[2][1], WaaI[2][1], RfaI[2][1], UDP-D-galactose:(glucosyl)lipopolysaccharide-α-1,3-D-galactosyltransferase[2][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rfaQGPSBIJYZK[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rfaI)    Textpresso(rfaI)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.