rhsB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rhsB''  
''rhsB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3466, b3482, JW5679''<ref name='LIB:Riley_2006'/>
''ECK3466, b3482, JW5679''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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RhsB protein in rhs element<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
RhsB protein in rhs element<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Function unknown, encoded within RhsB repeat; hotspot for chromosomal duplication formation<ref name='LIB:EcoGene'/>
Function unknown, encoded within RhsB repeat; hotspot for chromosomal duplication formation<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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rhsB element core protein RshB<ref name='LIB:Riley_2006'/>, B3482<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
rhsB element core protein RshB<ref name='LIB:Riley_2006'/>, B3482<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rhsB|rhsB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rhsB|rhsB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rhsB&loc=MG1655:3617215..3621450,W3110:4021223..4016988,REL606:3549880..3554115,DH10B:3714960..3719195 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3714960&end=3719195&gene=rhsB&aa=msgkpaarqgdmtqyggsivqgsagvrigaptgvacsvcpggvtsghpvnpllgakvlpgetdialpgplpfilsrtyssyrtktpapvgslgpgwkmpadirlqlrdntlilsdnggrslyfehlfpgedgysrseslwlvrggvakldeghrlaalwqalpeelrlsphrylatnspqgpwwllgwcervpeadevlpaplppyrvltglvdrfgrtqtfhreaagefsgeitgvtdgawrhfrlvlttqaqraeearqqaisggtepsafpdtlpgyteygrdngirlsavwlthdpeypenlpaaplvrygwtprgelavvydrsgkqvrsftyddkyrgrmvahrhtgrpeiryrydsdgrvteqlnpaglsytyqyekdrititdsldrrevlhtqgeaglkrvvkkehadgsvtqsqfdavgrlraqtdaagrtteyspdvvtglitrittpdgrasafyynhhnqltsatgpdglelrreydelgrliqetapdgditryrydnphsdlpcatedatgsrktmtwsrygqllsftdcsgyvtrydhdrfgqmtavhreeglsqyraydsrgqliavkdtqghetryeyniagdltaviapdgsrngtqydawgkavrttqggltrsmeydaagrvirltsengshttfrydvldrliqetgfdgrtqryhhdltgklirsedeglvthwhydeadrlthrtvkgetaerwqydergwltdishiseghrvavhyrydekgrltgerqtvhhpqteallwqhetrhaynaqglanrcipdslpavewltygsgylagmklgdtplveytrdrlhretlrsfgryelttaytpagqlqsqhlnsllsdrdytwndngelirissprqtrsysysttgrltgvhttaanldiripyatdpagnrlpdpelhpdstlsmwpdnriardahylyrydrhgrltektdlipegvirtdderthryhydsqhrlvhytrtqyeeplvesrylydplgrrvakrvwrrerdltgwmslsrkpqvtwygwdgdrlttiqndrsriqtiyqpgsftplirvetatgelaktqrrsladalqqsggedggsvvfppvlvqmldrleseiladrvseesrrwlascgltveqmqnqmdpvytparkihlyhcdhrglplalistegatawcaeydewgnllneenphqlqqlirlpgqqydeesglyynrhryydplqgryitqdpiglkggwnlygyqlnpisdidplglsmwedaksgactnglcgtlsamigpdkfdsidstaydalnkinsqsicedkefaglickdnsgryfstapnrgerkgsypfnspcpngtekvsayhthgadshgeywdeifsgkdekivkskdnniksfylgtpsgnfkaidnhgkeitnrkglpnvcrvhgnm Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhsB+AND+escherichia+coli Pubmed(rhsB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rhsB Textpresso(rhsB)]


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Revision as of 00:24, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rhsB

Gene Synonym(s)

ECK3466, b3482, JW5679[1]

Product Desc.

RhsB protein in rhs element[2][3]

Function unknown, encoded within RhsB repeat; hotspot for chromosomal duplication formation[4]

Product Synonyms(s)

rhsB element core protein RshB[1], B3482[2][1], RhsB[2][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhsB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rhsB)    Textpresso(rhsB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Swiss-Prot prediction of 26 aa signal peptide is a probable false positve.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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