ppdC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ppdC'' | ''ppdC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2819, b2823, JW2791, ygdA''<ref name='LIB:Riley_2006'/> | ''ECK2819, b2823, JW2791, ygdA''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted protein<ref name='LIB:EcoCyc10.6'/>; prepilin peptidase dependent protein C<ref name='LIB:EcoCyc11.1'/> | predicted protein<ref name='LIB:EcoCyc10.6'/>; prepilin peptidase dependent protein C<ref name='LIB:EcoCyc11.1'/> | ||
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Required for swarming phenotype, function unknown; first 10 residues may be cleaved by prepilin peptidase to leave an N-terminal methylphenylalanine<ref name='LIB:EcoGene'/> | Required for swarming phenotype, function unknown; first 10 residues may be cleaved by prepilin peptidase to leave an N-terminal methylphenylalanine<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted protein<ref name='LIB:Riley_2006'/>, B2823<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpdC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted protein<ref name='LIB:Riley_2006'/>, B2823<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpdC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:recC|recC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:recC|recC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ppdC&loc=MG1655:2960786..2960463,W3110:2961420..2961097,REL606:2857383..2857060,DH10B:3054656..3054333 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3054656&end=3054333&gene=ppdC&aa=msaslknqqgfslpevmlamvlmvmivtalsgfqrtlmnslasrnqyqqlwrhgwqqtqlraisppanwqvnrmqtsqagcvsisvtlvspggregemtrlhcpnrq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ppdC+AND+escherichia+coli Pubmed(ppdC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ppdC Textpresso(ppdC)] | |||
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Revision as of 00:19, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ppdC |
|---|---|
| Gene Synonym(s) |
ECK2819, b2823, JW2791, ygdA[1] |
| Product Desc. |
predicted protein[2]; prepilin peptidase dependent protein C[3] Required for swarming phenotype, function unknown; first 10 residues may be cleaved by prepilin peptidase to leave an N-terminal methylphenylalanine[4] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.