aer:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''aer'' | ''aer'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK3062, b3072, JW3043, air, yqjJ''<ref name='LIB:Riley_2006'/> | ''ECK3062, b3072, JW3043, air, yqjJ''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
aerotaxis sensor receptor, flavoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | aerotaxis sensor receptor, flavoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
Aerotaxis and redox taxis sensor; flavoprotein; senses intracellular energy (redox) levels, and mediates energy taxis, as does Tsr<ref name='LIB:EcoGene'/> | Aerotaxis and redox taxis sensor; flavoprotein; senses intracellular energy (redox) levels, and mediates energy taxis, as does Tsr<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
fused signal transducer for aerotaxis sensory component<ref name='LIB:Riley_2006'/>, methyl accepting chemotaxis component<ref name='LIB:Riley_2006'/>, B3072<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YqjJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Air<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Aer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | fused signal transducer for aerotaxis sensory component<ref name='LIB:Riley_2006'/>, methyl accepting chemotaxis component<ref name='LIB:Riley_2006'/>, B3072<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YqjJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Air<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Aer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:aer|aer]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:aer|aer]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=aer&loc=MG1655:3217098..3215578,W3110:3217732..3216212,DH10B:3314843..3313323,REL606:3151893..3150373 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3151893&end=3150373&gene=aer&aa=msshpyvtqqntpladdttlmsttdlqsyithandtfvqvsgytlqelqgqphnmvrhpdmpkaafadmwftlkkgepwsgivknrrkngdhywvranavpmvregkisgymsirtratdeeiaaveplykalnagrtskrihkglvvrkgwlgklpslplrwrargvmtlmfillaamlwfvaapvvtyilcalvvllasacfewqivrpienvahqalkvatgernsvehlnrsdelgltlravgqlglmcrwlindvssqvssvrngsetlakgtdelnehtqqtvdnvqqtvatmnqmaasvkqnsatasaadklsitasnaavqggeamttviktmddiadstqrigtitslindiafqtnilalnaaveaarageqgkgfavvagevrhlasrsanaandirklidasadkvqsgsqqvhaagrtmedivaqvknvtqliaqishstleqadglssltravdelnlitqknaelveesaqvsamvkhrasrledavtvlh Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=aer+AND+escherichia+coli Pubmed(aer)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=aer Textpresso(aer)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:13, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
aer |
|---|---|
| Gene Synonym(s) |
ECK3062, b3072, JW3043, air, yqjJ[1] |
| Product Desc. |
aerotaxis sensor receptor, flavoprotein[2][3] Aerotaxis and redox taxis sensor; flavoprotein; senses intracellular energy (redox) levels, and mediates energy taxis, as does Tsr[4] |
| Product Synonyms(s) |
fused signal transducer for aerotaxis sensory component[1], methyl accepting chemotaxis component[1], B3072[2][1], YqjJ[2][1], Air[2][1], Aer[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Energy taxis includes aerotaxis, redox taxis and glycerol taxis. aer is up-regulated by FlhCD and CRP. aer mutants are down for genes involved in anaerobic respiration and the Entner-Doudoroff pathway. The six operons up-regulated by Aer are dmsABC, fdnGHI, frdABCD, glpAB, nrfABCDE and edd.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.