alpA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''alpA'' | ''alpA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2620, b2624, JW2604, alp''<ref name='LIB:Riley_2006'/> | ''ECK2620, b2624, JW2604, alp''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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AlpA transcriptional activator; CP4-57 prophage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | AlpA transcriptional activator; CP4-57 prophage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])<ref name='LIB:EcoGene'/> | Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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CP4-57 prophage; DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, Alp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2624<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | CP4-57 prophage; DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, Alp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2624<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Cellular Component''' | |||
* GO:0019038 provirus ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
'''Biological Process''' | |||
* GO:0045893 positive regulation of transcription, DNA-dependent ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:alpA|alpA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:alpA|alpA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=alpA&loc=MG1655:2756666..2756878,W3110:2757300..2757512,DH10B:2848431..2848643 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2848431&end=2848643&gene=alpA&aa=mnnrsavrilrlpaviqktgmaratiydwlnpksprydatfpkkrmlgvksvgwieaeidewlsqrckli Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=alpA+AND+escherichia+coli Pubmed(alpA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=alpA Textpresso(alpA)] | |||
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Revision as of 00:12, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
alpA |
|---|---|
| Gene Synonym(s) |
ECK2620, b2624, JW2604, alp[1] |
| Product Desc. |
AlpA transcriptional activator; CP4-57 prophage[2][3] Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])[4] |
| Product Synonyms(s) |
CP4-57 prophage; DNA-binding transcriptional activator[1], Alp[2][1], B2624[2][1], AlpA[2][1] |
| Function from GO |
Molecular Function
Cellular Component
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.