amiA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''amiA'' | ''amiA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2430, b2435, JW2428, yfeE''<ref name='LIB:Riley_2006'/> | ''ECK2430, b2435, JW2428, yfeE''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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N-acetylmuramoyl-L-alanine amidase 1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | N-acetylmuramoyl-L-alanine amidase 1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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N-acetylmuramyl-L-alanine amidase, periplasmic; role in septal cleavage during cell division<ref name='LIB:EcoGene'/> | N-acetylmuramyl-L-alanine amidase, periplasmic; role in septal cleavage during cell division<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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N-acetylmuramoyl-l-alanine amidase I<ref name='LIB:Riley_2006'/>, B2435<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfeE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AmiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | N-acetylmuramoyl-l-alanine amidase I<ref name='LIB:Riley_2006'/>, B2435<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfeE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AmiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Cellular Component''' | |||
* GO:0042597 periplasmic space ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0009252 peptidoglycan biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
'''Molecular Function''' | |||
* GO:0008745 N-acetylmuramoyl-L-alanine amidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:amiA-hemF|amiA-hemF]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:amiA-hemF|amiA-hemF]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=amiA&loc=MG1655:2550374..2551243,W3110:2557798..2558667,DH10B:2642139..2643008,REL606:2479871..2480740 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2479871&end=2480740&gene=amiA&aa=mstfkplktltsrrqvlkaglaaltlsgmsqaiakdellktsnghskpkakksggkrvvvldpghggidtgaigrngskekhvvlaiaknvrsilrnhgidarltrsgdtfiplydrveiahkhgadlfmsihadgftnpkaagasvfalsnrgassamakylserenradevagkkatdkdhllqqvlfdlvqtdtiknsltlgshilkkikpvhklhsrnteqaafvvlkspsvpsvlvetsfitnpeeerllgtaafrqkiataiaegvisyfhwfdnqkahskkr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=amiA+AND+escherichia+coli Pubmed(amiA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=amiA Textpresso(amiA)] | |||
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Revision as of 00:12, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
amiA |
|---|---|
| Gene Synonym(s) |
ECK2430, b2435, JW2428, yfeE[1] |
| Product Desc. |
N-acetylmuramoyl-L-alanine amidase 1[2][3] N-acetylmuramyl-L-alanine amidase, periplasmic; role in septal cleavage during cell division[4] |
| Product Synonyms(s) |
N-acetylmuramoyl-l-alanine amidase I[1], B2435[2][1], YfeE[2][1], AmiA[2][1] |
| Function from GO |
Cellular Component
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Verified Tat substrate: AmiA has a predicted Tat-only (Class I) 34 aa signal peptide (Tullman-Ercek, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.