asr:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''asr'' | ''asr'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1592, b1597, JW5826''<ref name='LIB:Riley_2006'/> | ''ECK1592, b1597, JW5826''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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acid shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | acid shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Acid shock-inducible periplasmic protein required for acid tolerance; expression controlled by phoBR<ref name='LIB:EcoGene'/> | Acid shock-inducible periplasmic protein required for acid tolerance; expression controlled by phoBR<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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acid shock-inducible periplasmic protein<ref name='LIB:Riley_2006'/>, B1597<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Asr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | acid shock-inducible periplasmic protein<ref name='LIB:Riley_2006'/>, B1597<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Asr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0001101 response to acid ([http://www.geneontology.org/GO.evidence.shtml IEP,IMP]) | |||
* GO:0010043 response to zinc ion ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
'''Cellular Component''' | |||
* GO:0042597 periplasmic space ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:asr|asr]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:asr|asr]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=asr&loc=MG1655:1669400..1669708,W3110:1673090..1673398,DH10B:1760361..1760669,REL606:1648571..1648879 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1648571&end=1648879&gene=asr&aa=mkkqiegmtmkkvlalvvaaamglssaafaaettttpaptatttkaapaktthhkkqhkaapaqkaqaakkhhkntkaeqkapeqkaqaakkhakkhshqqpakpaaqpaa Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=asr+AND+escherichia+coli Pubmed(asr)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=asr Textpresso(asr)] | |||
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Revision as of 00:10, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
asr |
|---|---|
| Gene Synonym(s) |
ECK1592, b1597, JW5826[1] |
| Product Desc. |
Acid shock-inducible periplasmic protein required for acid tolerance; expression controlled by phoBR[4] |
| Product Synonyms(s) |
acid shock-inducible periplasmic protein[1], B1597[2][1], Asr[2][1] |
| Function from GO |
Biological Process
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Asr start codon confirmed by site-directed mutagenesis. Asr 21 aa signal peptide cleavage also confirmed by N-terminal sequencing. Protease responsible for second Asr N-terminal cleavage is unknown, but is not DegP.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.