astC:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''astC''  
''astC''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1746, b1748, JW1737, argM, cstC, ydjW''<ref name='LIB:Riley_2006'/>
''ECK1746, b1748, JW1737, argM, cstC, ydjW''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Succinylornithine transaminase, mutant cannot catabolize arginine, overproduction complements argD mutants; carbon starvation protein<ref name='LIB:EcoGene'/>
Succinylornithine transaminase, mutant cannot catabolize arginine, overproduction complements argD mutants; carbon starvation protein<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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succinylornithine transaminase, PLP-dependent<ref name='LIB:Riley_2006'/>, B1748<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdjW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
succinylornithine transaminase, PLP-dependent<ref name='LIB:Riley_2006'/>, B1748<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdjW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0043825 succinylornithine transaminase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006593 ornithine catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006527 arginine catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:astCADBE|astCADBE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:astCADBE|astCADBE]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=astC&loc=MG1655:1830006..1828786,W3110:1833696..1832476,DH10B:1920577..1919357,REL606:1809247..1808027 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1809247&end=1808027&gene=astC&aa=msqpitrenfdewmipvyapapfipvrgegsrlwdqqgkeyidfaggiavnalghahpelrealneqaskfwhtgngytnepvlrlakklidatfadrvffcnsgaeaneaalklarkfahdrygshksgivafknafhgrtlftvsaggqpaysqdfaplpadirhaayndinsasaliddstcavivepiqgeggvvpasnaflqglrelcnrhnallifdevqtgvgrtgelyaymhygvtpdllttakalgggfpvgallateecarvmtvgthgttyggnplasavagkvlelintpemlngvkqrhdwfverlntinhryglfsevrglglligcvlnadyagqakqisqeaakagvmvliaggnvvrfapalnvseeevttgldrfaaacehfvsrgss Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=astC+AND+escherichia+coli Pubmed(astC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=astC Textpresso(astC)]


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Revision as of 00:10, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

astC

Gene Synonym(s)

ECK1746, b1748, JW1737, argM, cstC, ydjW[1]

Product Desc.

AstC[2][3];

Component of SUCCORNTRANSAM-CPLX[2]

Succinylornithine transaminase, mutant cannot catabolize arginine, overproduction complements argD mutants; carbon starvation protein[4]

Product Synonyms(s)

succinylornithine transaminase, PLP-dependent[1], B1748[2][1], YdjW[2][1], CstC[2][1], ArgM[2][1], AstC[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): astCADBE[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(astC)    Textpresso(astC)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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