azoR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''azoR'' | ''azoR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1405, b1412, JW1409, acpD''<ref name='LIB:Riley_2006'/> | ''ECK1405, b1412, JW1409, acpD''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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NADH-azoreductase, FMN-dependent<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | NADH-azoreductase, FMN-dependent<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Azoreductase, NADH-dependent<ref name='LIB:EcoGene'/> | Azoreductase, NADH-dependent<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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NADH-azoreductase, FMN-dependent<ref name='LIB:Riley_2006'/>, B1412<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AzoR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | NADH-azoreductase, FMN-dependent<ref name='LIB:Riley_2006'/>, B1412<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AzoR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0010181 FMN binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0050446 azobenzene reductase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:azoR|azoR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:azoR|azoR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=azoR&loc=MG1655:1480884..1480279,W3110:1484574..1483969,DH10B:1571479..1570874 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1571479&end=1570874&gene=azoR&aa=mskvlvlkssilagysqsnqlsdyfveqwrekhsadeitvrdlaanpipvldgelvgalrpsdapltprqqealalsdeliaelkahdviviaapmynfnistqlknyfdlvaragvtfrytengpeglvtgkkaivitsrggihkdgptdlvtpylstflgfigitdvkfvfaegiaygpemaakaqsdakaaidsivsa Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=azoR+AND+escherichia+coli Pubmed(azoR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=azoR Textpresso(azoR)] | |||
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Revision as of 00:09, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
azoR |
|---|---|
| Gene Synonym(s) |
ECK1405, b1412, JW1409, acpD[1] |
| Product Desc. |
NADH-azoreductase, FMN-dependent[2][3] Azoreductase, NADH-dependent[4] |
| Product Synonyms(s) |
NADH-azoreductase, FMN-dependent[1], B1412[2][1], AzoR[2][1], AcpD[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
AzoR was identifed by N-terminal sequencing in an acyl carrier protein phosphodiesterase preparation and mistaken for the acpD gene. The real acpD gene has been identified (yajB) and renamed acpH. PDB 1TIK is mislabeled as a ACP phosphodiesterase.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.