cfa:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''cfa'' | ''cfa'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK1657, b1661, JW1653, cdfA''<ref name='LIB:Riley_2006'/> | ''ECK1657, b1661, JW1653, cdfA''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase<ref name='LIB:EcoGene'/> | Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)<ref name='LIB:Riley_2006'/>, B1661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CdfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)<ref name='LIB:Riley_2006'/>, B1661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CdfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:cfa|cfa]]<ref name='LIB:EcoCyc10.6'/>, cdfA | transcription unit(s): [[:Category:Txn_unit:cfa|cfa]]<ref name='LIB:EcoCyc10.6'/>, cdfA | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=cfa&loc=MG1655:1739437..1740585,W3110:1743127..1744275,DH10B:1830008..1831156,REL606:1718680..1719828 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1718680&end=1719828&gene=cfa&aa=mssscieevsvpddnwyrianellsragiaingsapadirvknpdffkrvlqegslglgesymdgwwecdrldmffskvlraglenqlphhfkdtlriagarlfnlqskkrawivgkehydlgndlfsrmldpfmqyscaywkdadnlesaqqaklkmiceklqlkpgmrvldigcgwgglahymasnydvsvvgvtisaeqqkmaqercegldvtillqdyrdlndqfdrivsvgmfehvgpknydtyfavvdrnlkpegifllhtigskktdlnvdpwinkyifpngclpsvrqiaqssephfvmedwhnfgadydttlmawyerflaawpeiadnyserfkrmftyylnacagafrardiqlwqvvfsrgvenglrvar Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cfa+AND+escherichia+coli Pubmed(cfa)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cfa Textpresso(cfa)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:07, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cfa |
|---|---|
| Gene Synonym(s) |
ECK1657, b1661, JW1653, cdfA[1] |
| Product Desc. |
Component of cyclopropane fatty acyl phospholipid synthase[2][3] Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase[4] |
| Product Synonyms(s) |
cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)[1], B1661[2][1], Cfa[2][1], CdfA[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Cfa binds a bicarbonate ion that is involved in catalysis. RpoS regulon. Overexpression causes abnormal biofilm architecture.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.