chbB:Quickview: Difference between revisions
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''chbB'' | ''chbB'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK1736, b1738, JW1727, celA''<ref name='LIB:Riley_2006'/> | ''ECK1736, b1738, JW1727, celA''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
ChbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ChbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
N,N'-diacetylchitobiose utilization, enzyme IIB(Chb) of the PTS transport system<ref name='LIB:EcoGene'/> | N,N'-diacetylchitobiose utilization, enzyme IIB(Chb) of the PTS transport system<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
N,N'-diacetylchitobiose-specific enzyme IIB component of PTS<ref name='LIB:Riley_2006'/>, B1738<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CelA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS<ref name='LIB:Riley_2006'/>, B1738<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CelA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:chbBCARFG|chbBCARFG]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:chbBCARFG|chbBCARFG]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=chbB&loc=MG1655:1819643..1819323,W3110:1823333..1823013,DH10B:1910214..1909894 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1910214&end=1909894&gene=chbB&aa=mekkhiylfcsagmstsllvskmraqaekyevpviieafpetlagekgqnadvvllgpqiaymlpeiqrllpnkpvevidsllygkvdglgvlkaavaaikkaaan Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=chbB+AND+escherichia+coli Pubmed(chbB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=chbB Textpresso(chbB)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:07, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
chbB |
|---|---|
| Gene Synonym(s) |
ECK1736, b1738, JW1727, celA[1] |
| Product Desc. |
N,N'-diacetylchitobiose utilization, enzyme IIB(Chb) of the PTS transport system[4] |
| Product Synonyms(s) |
N,N'-diacetylchitobiose-specific enzyme IIB component of PTS[1], B1738[2][1], ChbB[2][1], CelA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The chb operon is induced by N,N'-diacetylchitobiose. The chb operon was previously thought to encode a cryptic cel operon for a cellobiose degradation system. The Cel+ phenotype is due to mutations making expression chitobiose-independent, but a fully induced operon did not support growth on cellobiose, implying a mutation altering the substrate specificity is needed; several candidate mutations were noted in Genbank, but not proven to alter the specificity of the system (Keyhani, 1997). In contrast, a later study claim that mutations making the operon expression high-level constitutive by chbR and nagC mutations are sufficient for the Cel+ phenotype and that no mutations altering substrate specificity are required (Kachroo, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.