chbG:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''chbG'' | ''chbG'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1731, b1733, JW1722, ydjC, celG''<ref name='LIB:Riley_2006'/> | ''ECK1731, b1733, JW1722, ydjC, celG''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Member of chb operon, function unknown<ref name='LIB:EcoGene'/> | Member of chb operon, function unknown<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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conserved protein<ref name='LIB:Riley_2006'/>, B1733<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChbG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdjC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CelG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | conserved protein<ref name='LIB:Riley_2006'/>, B1733<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChbG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdjC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CelG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:chbBCARFG|chbBCARFG]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:chbBCARFG|chbBCARFG]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=chbG&loc=MG1655:1815159..1814410,W3110:1818849..1818100,DH10B:1905730..1904981,REL606:1793651..1794400 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1793651&end=1794400&gene=chbG&aa=merllivnaddfglskgqnygiieacrngivtsttalvngqaidhavqlsrdepslaigmhfvltmgkpltampgltrdgvlgkwiwqlaeedalpleeitqelvsqylrfielfgrkpthldshhhvhmfpqifpivarfaaeqgialradrqmafdlpvnlrttqgfssafygeeiseslflqvlddaghrgdrslevmchpafidntirqsaycfprlteldvltsaslkgaiaqrgyrlgsyrdv Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=chbG+AND+escherichia+coli Pubmed(chbG)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=chbG Textpresso(chbG)] | |||
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Revision as of 00:07, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
chbG |
|---|---|
| Gene Synonym(s) |
ECK1731, b1733, JW1722, ydjC, celG[1] |
| Product Desc. |
Member of chb operon, function unknown[4] |
| Product Synonyms(s) |
conserved protein[1], B1733[2][1], ChbG[2][1], YdjC[2][1], CelG[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The chb operon is induced by N,N'-diacetylchitobiose. The chb operon was previously thought to encode a cryptic cel operon for a cellobiose degradation system. The Cel+ phenotype is due to mutations making expression chitobiose-independent, but a fully induced operon did not support growth on cellobiose, implying a mutation altering the substrate specificity is needed; several candidate mutations were noted in Genbank, but not proven to alter the specificity of the system (Keyhani, 1997). In contrast, a later study claim that mutations making the operon expression high-level constitutive by chbR and nagC mutations are sufficient for the Cel+ phenotype and that no mutations altering substrate specificity are required (Kachroo, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.