cobC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''cobC'' | ''cobC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0631, b0638, JW0633, phpB''<ref name='LIB:Riley_2006'/> | ''ECK0631, b0638, JW0633, phpB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Probable alpha-ribazole-5'-phosphate phosphatase; potential partial cobalamin biosynthesis pathway<ref name='LIB:EcoGene'/> | Probable alpha-ribazole-5'-phosphate phosphatase; potential partial cobalamin biosynthesis pathway<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted alpha-ribazole-5'-P phosphatase<ref name='LIB:Riley_2006'/>, PhpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0638<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted alpha-ribazole-5'-P phosphatase<ref name='LIB:Riley_2006'/>, PhpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0638<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0009236 cobalamin biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
'''Molecular Function''' | |||
* GO:0019175 alpha-ribazole-5'-P phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:cobC|cobC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:cobC|cobC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=cobC&loc=MG1655:669130..668519,W3110:670329..669718,DH10B:608462..607851,DH10B:721722..721111,REL606:651880..652491 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=651880&end=652491&gene=cobC&aa=mrlwlirhgetqanidglysghaptpltargieqaqnlhtllhgvsfdlvlcseleraqhtarlvlsdrqlpvqiipelnemffgdwemrhhrdlmqedaenysawcndwqhaiptngegfqafsqrverfiarlsefqhyqnilvvshqgvlslliarligmpaeamwhfrvdqgcwsaidinqkfatlrvlnsraigvena Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cobC+AND+escherichia+coli Pubmed(cobC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cobC Textpresso(cobC)] | |||
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Revision as of 00:07, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cobC |
|---|---|
| Gene Synonym(s) |
ECK0631, b0638, JW0633, phpB[1] |
| Product Desc. |
Probable alpha-ribazole-5'-phosphate phosphatase; potential partial cobalamin biosynthesis pathway[2] |
| Product Synonyms(s) |
predicted alpha-ribazole-5'-P phosphatase[1], PhpB[3][1], B0638[3][1], CobC[3][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Primarily characterized in Salmonella.[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7