cobS:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''cobS''  
''cobS''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK1987, b1992, JW1970''<ref name='LIB:Riley_2006'/>
''ECK1987, b1992, JW1970''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
COBS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
COBS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Line 41: Line 41:
Partial cobalamin biosynthesis pathway present in E. coli<ref name='LIB:EcoGene'/>
Partial cobalamin biosynthesis pathway present in E. coli<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
cobalamin 5'-phosphate synthase<ref name='LIB:Riley_2006'/>, B1992<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
cobalamin 5'-phosphate synthase<ref name='LIB:Riley_2006'/>, B1992<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Biological Process'''
* GO:0009236 cobalamin biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Molecular Function'''
* GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity ([http://www.geneontology.org/GO.evidence.shtml IGI])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:cobUST|cobUST]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cobUST|cobUST]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=cobS&loc=MG1655:2063246..2062503,W3110:2067359..2066616,REL606:2003222..2002479,DH10B:2154254..2153511 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2154254&end=2153511&gene=cobS&aa=msklfwamlsfitrlpvprrwsqgldfehysrgiitfpliglllgaisglvfmvlqawcgaplaalfsvlvlvlmtggfhldgladtcdgvfsarsrdrmleimrdsrlgthgglalifvvlakilvlselalrgesilaslaaacavsrgtaallmyrhryareeglgnvfigkidgrqtcvtlglaaifaavllpgmhgvaamvvtmvaifilgqllkrtlggqtgdtlgaaielgelvfllall Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cobS+AND+escherichia+coli Pubmed(cobS)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cobS Textpresso(cobS)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 00:07, 22 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

cobS

Gene Synonym(s)

ECK1987, b1992, JW1970[1]

Product Desc.

COBS[2][3]

Partial cobalamin biosynthesis pathway present in E. coli[4]

Product Synonyms(s)

cobalamin 5'-phosphate synthase[1], B1992[2][1], CobS[2][1]

Function from GO

Biological Process

Molecular Function

  • GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity (IGI)
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cobUST[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(cobS)    Textpresso(cobS)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]





References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=cobS:Quickview&oldid=1032213"