cueR:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''cueR''  
''cueR''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0481, b0487, JW0476, ybbI, copR''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK0481, b0487, JW0476, ybbI, copR''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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CueR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
CueR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Activator of copper-responsive regulon genes cueO and copA; MerR homolog<ref name='LIB:EcoGene'/>
Activator of copper-responsive regulon genes cueO and copA; MerR homolog<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional activator of copper-responsive regulon genes<ref name='LIB:Riley_2006'/>, B0487<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CueR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CopR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
DNA-binding transcriptional activator of copper-responsive regulon genes<ref name='LIB:Riley_2006'/>, B0487<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CueR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CopR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP,IGI,IMP])
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP,IGI])
'''Biological Process'''
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP,IGI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cueR|cueR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cueR|cueR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=cueR&loc=MG1655:513217..513624,W3110:513217..513624,DH10B:452548..452955,REL606:486161..486568 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=486161&end=486568&gene=cueR&aa=mnisdvakitgltskairfyeekglvtppmrsengyrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcchhrag Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cueR+AND+escherichia+coli Pubmed(cueR)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cueR Textpresso(cueR)]


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Revision as of 00:05, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

cueR

Gene Synonym(s)

ECK0481, b0487, JW0476, ybbI, copR[1][2]

Product Desc.

CueR transcriptional dual regulator[2][3]

Activator of copper-responsive regulon genes cueO and copA; MerR homolog[4]

Product Synonyms(s)

DNA-binding transcriptional activator of copper-responsive regulon genes[1], B0487[2][1], YbbI[2][1], CueR[2][1], CopR[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cueR[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(cueR)    Textpresso(cueR)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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